Table 4.
Candidate DNA repair genes for each cancer type
| Cancer Type(Percentage) | Genes(Percentage) |
|---|---|
| ACC (37) | MSH3(6.5),TP53(19.6),ERCC2(20.7) |
| BLCA (63.6) | ATM (13.6), TP53 (49.8) ,ERCC2 (9.7), CHEK2 (6.1) |
| BRCA (33.4) | TP53 (33.4) |
| CHOL (22.2) | TP53 (13.9), CHEK2 (8.3) |
| COAD (52) | TP53 (52.0) |
| ESCA (87.9) | TP53 (87.9) |
| GBM (28.7) | TP53 (28.7) |
| HNSC (71.6) | TP53 (71.2), CHEK2 (3.8) |
| KICH (33.3) | TP53 (33.3) |
| KIRC(10.9) | FANCE (4.4), DDB1 (4.9), RPA1 (2.2), TP53 (4.2), CHEK2 (2.2) |
| KIRP (17.2) | OGG1 (2.4), MSH3 (4.1), TDG (3.6), TP53 (4.1), CHEK2 (5.9) |
| LGG (50.4) | TP53 (48), CHEK2 (3.9) |
| LIHC (32.2) | TP53(32.2) |
| LUAD (57.8) | ERCC5 (3.3), TP53 (54.7), CHEK2 (7.2) |
| LUSC (79.2) | TP53 (79.2) |
| OV (84.8) | TP53 (84.8) |
| UCEC (34.7) | MSH4 (7.3), TP53 (29) |
| PAAD (84.2) | ERCC3 (8.8), XPC (9.9), WRN (14.6), TDG (9.9), FAN1 (9.9), EME2(11.1), TP53 (67.3), CHEK2 (17) |
| PCPG (17.7) | FANCD2 (5.1), ERCC8 (1.1), TDG (7.4), CHEK2 (5.1) |
| PRAD (19.3) | ATM (4.5), TP53 (10.8), POLI (1.4), CHEK2 (3.5) |
| READ (67.2) | TP53 (67.2) |
| SARC(37.0) | TP53 (37) |
| SKCM(22.7) | BLM (6.7), MPG (4.0), TP53 (10.7), CHEK2 (09.3) |
| STAD (57.9) | UVSSA (4.4), SLX4 (6.7), TP53 (49.9), CHEK2 (5.4) |
| THCA (4.5) | SMUG1 (0.8), TDG (2.2), TP53 (0.8), CHEK2 (1.4) |
| THYM (5.7) | CHEK2 (5.7) |
| UCS (91.2) | TP53 (91.2) |
| UVM(20) | FANCD2 (6.3), CCNH (2.5), TDG (3.7), CHEK2(7.5) |
| Pan Cancer(45.2) | ATM(5.5),TDG(1.7),TP53 (39.1),CHEK2 (4.0) |