Table A.23.
Analysis of one simulation replicate based on the LUAD and SKCM data: main effects and interactions identified by different approaches and their overlaps.
| LUAD | Main | Interaction | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
|
|
|
|||||||||
| CC | IPW | BPCA | PCA-TSR | NWDA | CC | IPW | BPCA | PCA-TSR | NWDA | |
| CC | 31 | 9 | 7 | 7 | 8 | 13 | 2 | 0 | 0 | 0 |
| IPW | 48 | 7 | 9 | 9 | 12 | 2 | 2 | 1 | ||
| BPCA | 62 | 29 | 11 | 10 | 6 | 1 | ||||
| PCA-TSR | 53 | 13 | 10 | 4 | ||||||
| NWDA | 67 | 9 | ||||||||
|
| ||||||||||
| SKCM | Main | Interaction | ||||||||
|
|
|
|||||||||
| CC | IPW | BPCA | PCA-TSR | NWDA | CC | IPW | BPCA | PCA-TSR | NWDA | |
|
| ||||||||||
| CC | 37 | 7 | 5 | 5 | 8 | 15 | 4 | 4 | 2 | 2 |
| IPW | 36 | 6 | 7 | 5 | 10 | 4 | 0 | 0 | ||
| BPCA | 48 | 14 | 11 | 19 | 3 | 3 | ||||
| PCA-TSR | 35 | 12 | 29 | 5 | ||||||
| NWDA | 50 | 16 | ||||||||