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. 2017 Jun 2;246(3):553–566. doi: 10.1007/s00425-017-2713-9

Table 1.

Primer sequences used for RT-qPCR analyses of twelve dehydrins, three EARLY BUD-BREAK 1 orthologs and the FLOWERING LOCUS T-LIKE 2 transcripts and three reference genes. Sequences are listed in the 5′–3′ direction

Gene IDs Accession no.a Forward primer Reverse primer Product length (bp)
PaDHN 1 MA_95995g0010 GCGGCCTATGCGGCAAGAA TCGACGAGCCCCGCCTTCTG 95
PaDHN 2.2 MA_187114g0010 CGCGGGCTGTTCGGTTTGTT CAGCGGACGCAAGCAGAGGA 115
PaDHN 4.3 MA_8320994g0010 GCGGCGGACAGCATTCTTCG TTGTTATCGTGGCCCGGAAGC 100
PaDHN 6 MA_747559g0010 TCCCGGAGGCCGGAACAAGT CGAAAGCGACATGGAGAGGTAGCC 102
PaDHN 9 MA_2408574g0010 TCACGGTCAGCAGGGGCAAG AACCGGAGCCGGAGCCATGT 101
PaDHN 13 MA_205576g0010 CCAGCTCAGAAGGCGGGGTTT TGGCATCCAGGCAGCATCTC 116
PaDHN 23 MA_144878g0010 GACTACCAGGACCGCAGCCACA GAGTCTGGCCTCCGGGAATCA 103
PaDHN 24 MA_12179g0010 CCCGGCTGTCTGGAATGCTC CCGCCAAAACCCCTAGCAGAACA 90
PaDHN 35 MA_10428426g0010 GGACGAAGGAACGCAGGATGA CTGGCATCCGGGCAGCTTCT 154
PaDHN 39 MA_86965g0010 CGAGGAGGATAAGGGCGGGAAT TGCGTGGGTTGTAGCAGGTG 115
PaDHN 40 MA_10257300g0010 CGTGGCAGGAGCAGGCATCA GAGCCGGAGCGCAAAGACCA 102
PaDHN 41 MA_10434136g0010 CCGCGAGAAGCCCGTCCATAC CACCAGCAAGAACACCGGCTGA 98
PaEBB1.1 MA_27642g0010 TGGCTTCGACACAACTGATCCTACCA TGTGGTTGATCTTGTGGCTGCTGT 114
PaEBB1.2 MA_30120g0010 CGCTCCTTCTTACTTTGGCTTCGAC CGTGTTGCTGCTGCTGTAATTCTGG 119
PaEBB1.3 MA_77420g0010 CCACCTCGGGTTGTGGTGTTTGTC GTCATAAGGCCAGTTGAGCCAATGC 88
PaFTL2
(Previously TFL1)
EF633467 ATGTTGGAGGAGACGACTTG GTGTTGGATCGCTTGGACTA 81
Pa ACTIN AY961918/MA_10427661g0030 TGAGCTCCCTGATGGGCAGGTGA TGGATACCAGCAGCTTCCATCCCAAT 105
Pa αTub X57980/
MA_93486g0010
GGCATACCGGCAGCTCTTC AAGTTGTTGGCGGCGTCTT 66
Pa elF5α AY961932/
MA_103714g0010
GCCGATGCGGGAGCTTCCAA TGCAGGGCCTGGCCTTAATGACG 88

aAccession no. based on Norway spruce genome sequence v.1. (http://congenie.org/)