Table 2.
Class taxonomic distribution across the samples isolated from a mangrove forest in Kerala, India.
| Kingdom | Phylum | Bacteria Class | VL1 | PYN | MAL | PGD | Average | SD |
|---|---|---|---|---|---|---|---|---|
| Bacteria | Proteobacteria | Gammaproteobacteria | 15.77 | 32.63 | 48.46 | 14.31 | 27.79 | 16.09 |
| Betaproteobacteria | 23.80 | 19.20 | 14.04 | 68.59 | 31.41 | 25.11 | ||
| Alphaproteobacteria | 8.94 | 20.07 | 22.92 | 11.56 | 15.87 | 6.68 | ||
| Deltaproteobacteria | 23.83 | 21.49 | 13.52 | 5.09 | 15.98 | 8.50 | ||
| Epsilonproteobacteria | 27.20 | 6.11 | 0.67 | 0.27 | 8.57 | 12.71 | ||
| unclassified | 0.31 | 0.33 | 0.26 | 0.14 | 0.26 | 0.08 | ||
| Zetaproteobacteria | 0.14 | 0.17 | 0.13 | 0.04 | 0.12 | 0.06 | ||
| Bacteriodes | Bacteroidia | 31.93 | 13.83 | 12.35 | 16.92 | 18.76 | 8.99 | |
| Cytophagia | 17.64 | 13.44 | 16.74 | 25.12 | 18.23 | 4.93 | ||
| Flavobacteria | 30.66 | 61.62 | 57.98 | 28.95 | 44.80 | 17.39 | ||
| Sphingobacteria | 18.43 | 9.69 | 11.22 | 28.00 | 16.83 | 8.36 | ||
| unclassified (derived from Bacteroidetes) | 1.34 | 1.42 | 1.72 | 1.02 | 1.37 | 0.29 | ||
| Firmicutes | Bacilli | 27.22 | 33.08 | 36.63 | 41.67 | 34.65 | 6.08 | |
| Clostridia | 68.85 | 62.91 | 59.44 | 54.49 | 61.42 | 6.04 | ||
| Erysipelotrichi | 0.74 | 0.84 | 0.85 | 0.87 | 0.83 | 0.06 | ||
| Negativicutes | 3.19 | 3.17 | 3.09 | 2.96 | 3.10 | 0.10 | ||
| Actinobacteria | Acidobacteria (class) | 8.73 | 6.53 | 6.99 | 7.82 | 7.52 | 0.97 | |
| Solibacteres | 22.03 | 17.59 | 15.46 | 12.59 | 16.92 | 3.98 | ||
| unclassified (derived from Acidobacteria) | 11.65 | 7.97 | 7.87 | 9.68 | 9.29 | 1.78 | ||
| Actinobacteria (class) | 57.58 | 67.91 | 69.68 | 69.92 | 66.27 | 5.86 | ||
| Archaea | Euryarchaeota | Archaeoglobi | 7.57 | 8.02 | 7.06 | 5.18 | 6.96 | 1.25 |
| Halobacteria | 6.22 | 12.37 | 13.98 | 13.40 | 11.49 | 3.58 | ||
| Methanobacteria | 7.29 | 6.93 | 6.30 | 6.35 | 6.72 | 0.48 | ||
| Methanococci | 9.59 | 10.54 | 10.95 | 7.55 | 9.66 | 1.52 | ||
| Methanomicrobia | 45.54 | 39.06 | 40.09 | 44.75 | 42.36 | 3.26 | ||
| Methanopyri | 1.62 | 1.36 | 1.37 | 1.25 | 1.40 | 0.16 | ||
| Thermococci | 12.31 | 13.41 | 12.45 | 10.87 | 12.26 | 1.05 | ||
| Thermoplasmata | 2.34 | 2.16 | 2.22 | 3.27 | 2.50 | 0.52 | ||
| unclassified (derived from Euryarchaeota) | 7.50 | 6.13 | 5.56 | 7.37 | 6.64 | 0.95 | ||
| Crenarchaeota | Thermoprotei | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 0.00 | |
| Thaumarchaeota | unclassified (derived from Thaumarchaeota) | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 0.00 | |
| Eukaryota | Streptophyta | Anthocerotopsida | 0.08 | 0.04 | 0.05 | 0.03 | 0.05 | 0.02 |
| Bryopsida | 11.35 | 11.87 | 11.93 | 5.76 | 10.23 | 2.99 | ||
| Charophyceae | 0.02 | 0.30 | 0.50 | 0.40 | 0.31 | 0.21 | ||
| Chlorokybophyceae | 0.19 | 0.56 | 0.35 | 0.31 | 0.35 | 0.15 | ||
| Coleochaetophyceae | 0.19 | 0.55 | 0.46 | 0.58 | 0.44 | 0.18 | ||
| Coniferopsida | 0.10 | 0.17 | 0.13 | 0.07 | 0.12 | 0.04 | ||
| Cycadopsida | 0.00 | 0.01 | 0.00 | 0.02 | 0.01 | 0.01 | ||
| Equisetopsida | 0.00 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | ||
| Gnetopsida | 0.10 | 0.00 | 0.02 | 0.03 | 0.04 | 0.04 | ||
| Isoetopsida | 5.66 | 6.06 | 5.70 | 2.59 | 5.00 | 1.62 | ||
| Jungermanniopsida | 0.02 | 0.10 | 0.11 | 0.07 | 0.07 | 0.04 | ||
| Liliopsida | 13.19 | 14.72 | 12.97 | 17.61 | 14.62 | 2.14 | ||
| Lycopodiopsida | 0.02 | 0.00 | 0.02 | 0.00 | 0.01 | 0.01 | ||
| Marattiopsida | 0.04 | 0.06 | 0.05 | 0.04 | 0.05 | 0.01 | ||
| Marchantiopsida | 0.11 | 0.49 | 0.58 | 0.52 | 0.43 | 0.21 | ||
| Mesostigmatophyceae | 0.31 | 0.30 | 0.57 | 0.29 | 0.37 | 0.13 | ||
| Polypodiopsida | 0.15 | 0.13 | 0.06 | 0.03 | 0.09 | 0.06 | ||
| Zygnemophyceae | 0.36 | 0.33 | 0.14 | 0.22 | 0.27 | 0.10 | ||
| unclassified | 68.13 | 64.31 | 66.38 | 71.41 | 67.55 | 3.01 | ||
| Eukaryota | Ascomycota | Dothideomycetes | 3.76 | 4.72 | 3.97 | 9.25 | 5.42 | 2.58 |
| Eurotiomycetes | 40.02 | 33.70 | 34.96 | 38.91 | 36.90 | 3.05 | ||
| Leotiomycetes | 4.20 | 4.04 | 3.91 | 3.59 | 3.94 | 0.26 | ||
| Pezizomycetes | 1.24 | 1.50 | 1.23 | 1.12 | 1.27 | 0.16 | ||
| Pneumocystidomycetes | 0.02 | 0.01 | 0.01 | 0.00 | 0.01 | 0.01 | ||
| Saccharomycetes | 22.78 | 26.30 | 25.60 | 19.83 | 23.63 | 2.95 | ||
| Schizosaccharomycetes | 6.68 | 7.32 | 7.30 | 6.34 | 6.91 | 0.48 | ||
| Sordariomycetes | 21.29 | 22.42 | 23.03 | 20.95 | 21.92 | 0.97 | ||
| Chordata | Actinopterygii | 8.95 | 10.53 | 10.60 | 8.04 | 9.53 | 1.26 | |
| Amphibia | 20.18 | 11.76 | 11.01 | 36.08 | 19.76 | 11.65 | ||
| Appendicularia | 0.02 | 0.02 | 0.00 | 0.03 | 0.02 | 0.01 | ||
| Ascidiacea | 4.02 | 4.82 | 4.77 | 3.25 | 4.21 | 0.74 | ||
| Aves | 5.92 | 8.13 | 6.94 | 4.24 | 6.31 | 1.65 | ||
| Chondrichthyes | 0.00 | 0.00 | 0.02 | 0.00 | 0.00 | 0.01 | ||
| Mammalia | 51.71 | 54.93 | 56.16 | 41.87 | 51.17 | 6.48 | ||
| Thaliacea | 0.00 | 0.00 | 0.02 | 0.00 | 0.00 | 0.01 | ||
| unclassified (derived from Chordata) | 9.19 | 9.81 | 10.48 | 6.50 | 9.00 | 1.75 | ||
| Arthropoda | Arachnida | 9.97 | 8.11 | 7.89 | 8.18 | 8.54 | 0.96 | |
| Branchiopoda | 0.00 | 0.00 | 0.03 | 0.05 | 0.02 | 0.03 | ||
| Cephalocarida | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||
| Diplopoda | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||
| Diplura | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||
| Ellipura | 0.00 | 0.00 | 0.03 | 0.00 | 0.01 | 0.02 | ||
| Insecta | 90.03 | 91.77 | 92.04 | 91.63 | 91.37 | 0.91 | ||
| Malacostraca | 0.00 | 0.09 | 0.00 | 0.11 | 0.05 | 0.06 | ||
| Maxillopoda | 0.00 | 0.03 | 0.00 | 0.03 | 0.01 | 0.02 | ||
| Merostomata | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||
| Ostracoda | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||
| Bacillariophyta | Bacillariophyceae | 44.06 | 53.78 | 53.02 | 44.07 | 48.73 | 5.40 | |
| Coscinodiscophyceae | 55.94 | 45.85 | 46.24 | 54.81 | 50.71 | 5.41 | ||
| Fragilariophyceae | 0.00 | 0.36 | 0.73 | 1.13 | 0.56 | 0.48 |