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. 2016 Sep 15;32(6):512–522. doi: 10.1007/s12264-016-0061-6

Table 1.

PCR primers and VNTR sequences (h, human).

Name Sequence Description
hSLC6A3 forward 5′-ATGAGTAAGAGCAAATGCTCCG-3′ Primers for human SLC6A3 mRNA CDS-3′UTR (coding sequence and 3′UTR); template: cDNA synthesis from SK-N-SH cell total RNA; insertion vector of amplification products: pcDNA3.1/NT-GFP-TOPO
hSLC6A3 reverse 5′-GCAGTTTTTCCATTGTGGATGTC-3′
hSLC6A3 3′UTR forward 5′-AGAGCGGCCGCGCAGTTTTTCCATTGTGGATGTC-3′ Primers for human DAT mRNA 3′UTR; restriction sites: Xho I, Not I; insertion vector of amplification products: psiCHECK2
hSLC6A3 3′UTR reverse 5′-CCGCTCGAGAGGGAGCAGAGACGAAGAC-3′
hSLC6A3 137MUT forward 5′-AGTTTTTGTTTACAAGAATAATTACGATATCTGAGTGAAG-3′ Overlap extension PCR primers for miR-137 seed region mutation
hSLC6A3 137MUT reverse 5′-CTTCACTCAGATATCGTAATTATTCTTGTAAACAAAAACT-3′
hGAPDH forward 5′-TGCACCACCAACTGCTTAGC-3′ Real-time PCR primers for human GAPDH mRNA
hGAPDH reverse 5′-GGCATGGACTGTGGTCATGAG-3′
hSLC6A3 forward 5′-TGTGCTGGAAGCTGGTCA-3′ Real-time PCR primers for human SLC6A3 mRNA
hSLC6A3 reverse 5′-GGGTCTGAAGGTCACAATGC-3′
Human mutation VNTR 5′-AGCGTGTACTACCCCAGGACGCATGCAGGGCCGCGAGA-3′ miR-491 seed region mutation of DAT mRNA VNTR
Human wild-type VNTR 5′-AGCGTGTACTACCCCAGGACGCATGCAGGGCCCCCACA-3′ Basic unit of DAT mRNA VNTR