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. 2017 Aug 21;4(4):ENEURO.0246-17.2017. doi: 10.1523/ENEURO.0246-17.2017

Table 3.

GR (Nr3c1) TF binding sites predicted by the JASPAR database (Wasserman and Sandelin, 2004)

Gene Chromosome Strand Number of sites Relative score Position in promoter Predicted binding site sequence
Ankrd1 19 - 2 0.8 723 CAAAGCAACACTTCCCAG
0.82 738 AGAAATAGGATGTCCCAA
Atf3 1 - 3 0.75 731 GAAGGCACATTTTCCTGA
0.75 1022 AAAAACGTTTTGTGGTTG
0.8 1163 GAGATCAAAGCGTCCTCT
Cebp-α 7 + 3 0.77 216 AAAAAGAAAGTTTTCCAG
0.75 336 GGGACCCTGTAGTTCTAG
0.75 412 GAGAAAAAGACGCACAAT
Cebp-β 2 + 0
Cebp-δ 16 + 2 0.75 102 GGACAGATGATTTTCTTG
0.76 348 AGAAACAGCAAGATGCTA
Gap43 16 - 3 0.76 29 GAAAAAAAAATTTTTTTT
0.75 381 AGAGAGAGAATGTGCGTG
0.75 1209 AGAAAGAATCACAACTGT
Hif1a 12 + 3 0.75 672 CAGTTCCTCATGTCGTGG
0.77 758 AAAATCATAATGTAAATA
0.76 879 AAAAAAAAAACTTACGTG
Hsbp1(Hsp27) 9 + 2 0.75 600 CAAAACACTCACTCCAGA
0.87 655 AAGAAAATTTTTTCCTAA
IL-6 5 + 1 0.84 352 AGAAACAACTGGTCCTGA
Jun 4 - 5 0.75 331 GGTGACATCATGGGCTAT
0.79 419 CAGAGAAGAATCTTCTAG
0.79 841 CAGATCATTCAGCCCTTT
0.77 1003 CGAAACTAAACTTCCAAG
0.77 1101 GAGAATAAAGTGTTGTGC
NFκBia 12 - 1 0.81 349 AGGACGAGCCAGTTCTTT
p21(Cdkn1a) 17 + 6 0.77 131 GACAGCATCCTTTCCTTC
0.81 184 GAAATGATCGCGTTCTGG
0.83 233 GGGAAAAAAATCTCCAGA
0.77 616 AGGCAAACACTGTACCAA
0.81 685 GAAAAGAGTTAGTCCTTC
0.75 740 CAGCTCTAACTGTACTGT
p53 11 + 1 0.85 403 GAAAACAGTCTTTACAGA
Sgk1 10 + 3 0.76 579 GAGACCATTCACTGCTAC
0.77 605 AGGCACATTATTTTATTT
0.75 766 AAGAAAAACCAATTCAAA
Sprr1a 3 - 0
Stat3 11 - 2 0.79 987 GGAAATGGCAAGTACTGT
0.76 1069 GGAAACAAGTTGGTCAAA

For each gene, the promoter was defined as -1000 and +300 bp from the transcription start site.