Table 3.
Gene | Chromosome | Strand | Number of sites | Relative score | Position in promoter | Predicted binding site sequence |
Ankrd1 | 19 | - | 2 | 0.8 | 723 | CAAAGCAACACTTCCCAG |
0.82 | 738 | AGAAATAGGATGTCCCAA | ||||
Atf3 | 1 | - | 3 | 0.75 | 731 | GAAGGCACATTTTCCTGA |
0.75 | 1022 | AAAAACGTTTTGTGGTTG | ||||
0.8 | 1163 | GAGATCAAAGCGTCCTCT | ||||
Cebp-α | 7 | + | 3 | 0.77 | 216 | AAAAAGAAAGTTTTCCAG |
0.75 | 336 | GGGACCCTGTAGTTCTAG | ||||
0.75 | 412 | GAGAAAAAGACGCACAAT | ||||
Cebp-β | 2 | + | 0 | |||
Cebp-δ | 16 | + | 2 | 0.75 | 102 | GGACAGATGATTTTCTTG |
0.76 | 348 | AGAAACAGCAAGATGCTA | ||||
Gap43 | 16 | - | 3 | 0.76 | 29 | GAAAAAAAAATTTTTTTT |
0.75 | 381 | AGAGAGAGAATGTGCGTG | ||||
0.75 | 1209 | AGAAAGAATCACAACTGT | ||||
Hif1a | 12 | + | 3 | 0.75 | 672 | CAGTTCCTCATGTCGTGG |
0.77 | 758 | AAAATCATAATGTAAATA | ||||
0.76 | 879 | AAAAAAAAAACTTACGTG | ||||
Hsbp1(Hsp27) | 9 | + | 2 | 0.75 | 600 | CAAAACACTCACTCCAGA |
0.87 | 655 | AAGAAAATTTTTTCCTAA | ||||
IL-6 | 5 | + | 1 | 0.84 | 352 | AGAAACAACTGGTCCTGA |
Jun | 4 | - | 5 | 0.75 | 331 | GGTGACATCATGGGCTAT |
0.79 | 419 | CAGAGAAGAATCTTCTAG | ||||
0.79 | 841 | CAGATCATTCAGCCCTTT | ||||
0.77 | 1003 | CGAAACTAAACTTCCAAG | ||||
0.77 | 1101 | GAGAATAAAGTGTTGTGC | ||||
NFκBia | 12 | - | 1 | 0.81 | 349 | AGGACGAGCCAGTTCTTT |
p21(Cdkn1a) | 17 | + | 6 | 0.77 | 131 | GACAGCATCCTTTCCTTC |
0.81 | 184 | GAAATGATCGCGTTCTGG | ||||
0.83 | 233 | GGGAAAAAAATCTCCAGA | ||||
0.77 | 616 | AGGCAAACACTGTACCAA | ||||
0.81 | 685 | GAAAAGAGTTAGTCCTTC | ||||
0.75 | 740 | CAGCTCTAACTGTACTGT | ||||
p53 | 11 | + | 1 | 0.85 | 403 | GAAAACAGTCTTTACAGA |
Sgk1 | 10 | + | 3 | 0.76 | 579 | GAGACCATTCACTGCTAC |
0.77 | 605 | AGGCACATTATTTTATTT | ||||
0.75 | 766 | AAGAAAAACCAATTCAAA | ||||
Sprr1a | 3 | - | 0 | |||
Stat3 | 11 | - | 2 | 0.79 | 987 | GGAAATGGCAAGTACTGT |
0.76 | 1069 | GGAAACAAGTTGGTCAAA |
For each gene, the promoter was defined as -1000 and +300 bp from the transcription start site.