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. Author manuscript; available in PMC: 2017 Aug 21.
Published in final edited form as: Curr Protoc Bioinformatics. 2013 Mar;CHAPTER 8:Unit–8.17. doi: 10.1002/0471250953.bi0817s41
Module ID (Col 1) Module numerical identifier.
Genes (Col 2) List of genes in the module and number of alterations per gene.
Total Percent Altered Cases (Col 3) Percentage of altered cases
Total Altered Cases (Col 4) Actual number of altered samples
Multiple Alteration Samples (Col 5) Number of samples with alterations in more than one gene of the module
p-value (Col 6) Nominal p-value
p*-value (Col 7) False Discovery Rate corrected p-value