Table 1. Hub genes in the module related with metastasis risk.
Gene | Probe | Co-expression analysis | Hub gene inPPI network | DEG analysis | |||
---|---|---|---|---|---|---|---|
p.Weighted | q.Weighted | cor.Weighted | logFC | FDR | |||
ABAT | 209459_s_at | 0 | 0 | −0.85 | YES | −1.80 | 8.77E-54 |
AGXT | 210326_at | 0 | 0 | −0.80 | YES | −1.88 | 5E-38 |
ALDH6A1 | 221590_s_at | 0 | 0 | −0.83 | YES | −2.26 | 1.98E-63 |
CYP4A11 | 211231_x_at | 0 | 0 | −0.81 | YES | −2.53 | 3.28E-86 |
DAO | 206878_at | 0 | 0 | −0.83 | YES | −1.38 | 2.75E-33 |
EHHADH | 205222_at | 0 | 0 | −0.81 | YES | −1.55 | 7.15E-45 |
ABCA6 | 217504_at | 0 | 0 | −0.80 | NO | −1.55 | 6.37E-42 |
AGXT2L1 | 221008_s_at | 0 | 0 | −0.82 | NO | −2.53 | 5.85E-44 |
ALDH2 | 201425_at | 0 | 0 | −0.85 | NO | −1.50 | 4.39E-68 |
ALDH5A1 | 203608_at | 0 | 0 | −0.81 | NO | −1.03 | 9.4E-29 |
ALDOB | 204704_s_at | 0 | 0 | −0.83 | NO | −2.90 | 4.04E-57 |
APOC4 | 206738_at | 0 | 0 | −0.85 | NO | −2.07 | 2.73E-40 |
CAT | 201432_at | 0 | 0 | −0.84 | NO | −1.18 | 2.23E-49 |
CES2 | 213509_x_at | 0 | 0 | −0.83 | NO | −1.41 | 9.92E-31 |
CYB5A | 207843_x_at | 0 | 0 | −0.80 | NO | −0.72 | 1.26E-21 |
DCXR | 217973_at | 0 | 0 | −0.88 | NO | −1.87 | 4.93E-53 |
DHRS1 | 213279_at | 0 | 0 | −0.83 | NO | −1.73 | 6.04E-59 |
EPHX2 | 209368_at | 0 | 0 | −0.82 | NO | −1.95 | 1.06E-59 |
F13B | 207810_at | 0 | 0 | −0.81 | NO | −0.85 | 2.7E-11 |
FMO4 | 206263_at | 0 | 0 | −0.83 | NO | −1.26 | 8.51E-32 |
GLYAT | 222083_at | 0 | 0 | −0.82 | NO | −3.57 | 1.87E-90 |
GYS2 | 214621_at | 0 | 0 | −0.81 | NO | −3.42 | 1.93E-81 |
HAGH | 205012_s_at | 0 | 0 | −0.88 | NO | −1.29 | 2.92E-43 |
HGD | 205221_at | 0 | 0 | −0.80 | NO | −1.59 | 4.94E-40 |
HRSP12 | 203790_s_at | 0 | 0 | −0.81 | NO | −1.48 | 1.18E-43 |
HSD17B6 | 37512_at | 0 | 0 | −0.81 | NO | −1.87 | 7.7E-30 |
PCK2 | 202847_at | 0 | 0 | −0.87 | NO | −1.53 | 3.88E-49 |
PXMP2 | 219076_s_at | 0 | 0 | −0.82 | NO | −1.08 | 1.48E-32 |
RGN | 210751_s_at | 0 | 0 | −0.81 | NO | −1.47 | 3.99E-51 |
SEC14L2 | 204541_at | 0 | 0 | −0.87 | NO | −1.78 | 2.27E-53 |
SERPINC1 | 210049_at | 0 | 0 | −0.82 | NO | −1.09 | 1.34E-16 |
SLC10A1 | 207185_at | 0 | 0 | −0.85 | NO | −3.04 | 2.13E-50 |
SLC27A5 | 219733_s_at | 0 | 0 | −0.90 | NO | −2.62 | 3.86E-66 |
SULT2A1 | 206292_s_at | 0 | 0 | −0.85 | NO | −1.77 | 1.62E-28 |
Abbreviations: PPI: protein-protein interaction. FC: fold change. DEG: differentially expressed genes. FDR: false discovery rate.