TABLE 2 .
Exemplary data on the variety of microorganisms identified in pooled RNA-seq data from 179 patients positive for EBOV based on qRT-PCR
| Organism | Protein | % identity | Alignment | E value |
|---|---|---|---|---|
| Escherichia coli G58-1 | Glycosyl transferase family 2 | 100 | 583 | 0.00E+0 |
| Lactobacillus fermentum | DNA-directed RNA polymerase subunit beta | 100 | 722 | 0.00E+0 |
| Wohlfahrtiimonas chitiniclastica | Hypothetical protein, partial | 100 | 583 | 0.00E+0 |
| Plasmodium falciparum UGT5.1 | Hypothetical protein C923_00328 | 100 | 511 | 4.50E−298 |
| Candida albicans WO-1 | Acetyl coenzyme A carboxylase | 100 | 504 | 2.50E−293 |
| Streptococcus pneumoniae EU-NP04 | Transposase DDE domain protein | 100 | 493 | 2.90E−292 |
| Myroides spp. | GMP synthase | 100 | 508 | 3.20E−292 |
| Haemophilus influenzae | Phosphoribosylformylglycinamidine synthase | 100 | 500 | 1.80E−289 |
| Acinetobacter baumannii AB307-0294 | 2-Isopropylmalate synthase | 100 | 479 | 1.20E−276 |
| Providencia rettgeri DSM 1131 | DNA polymerase III subunit alpha | 100 | 483 | 9.70E−276 |
| Plasmodium falciparum Vietnam Oak-Knoll | Hypothetical protein PFFVO_04502 | 100 | 476 | 2.20E−270 |
| Ureaplasma urealyticum | Cell division protein FtsH | 100 | 478 | 8.20E−264 |
| Lactobacillus fermentum | 6-Phosphogluconate dehydrogenase | 100 | 457 | 3.70E−260 |
| Plasmodium falciparum Tanzania (2000708) | Hypothetical protein PFTANZ_03315 | 100 | 450 | 5.70E−260 |
| Streptococcus sanguinis | Collagen-binding protein | 100 | 439 | 2.80E−251 |
| Acinetobacter baumannii | Putrescine/spermidine ABC transporter | 100 | 444 | 5.10E−251 |
| Haemophilus haemolyticus | Catalase | 100 | 415 | 8.40E−250 |
| Plasmodium falciparum 3D7 | Elongation factor 1 alpha | 100 | 433 | 4.60E−249 |
| Plasmodium falciparum MaliPS096_E11 | Histidine-tRNA ligase | 100 | 403 | 1.10E−235 |
| Myroides spp. | Multispecies collagenase | 100 | 413 | 6.20E−232 |
| Plasmodium falciparum Tanzania (2000708) | ATP-dependent protease HslVU, ATPase subunit | 100 | 410 | 2.10E−229 |
| Campylobacter spp. | Multispecies GTP-binding protein | 100 | 407 | 5.10E−228 |
| Streptococcus parasanguinis | Amino acid transporter | 100 | 402 | 8.80E−228 |
| Haemophilus parainfluenzae | l,d-Transpeptidase | 100 | 393 | 3.80E−224 |
| Escherichia coli | Leucyl-tRNA synthetase | 100 | 383 | 9.40E−224 |
| Myroides spp. | Diaminopimelate decarboxylase | 100 | 388 | 9.30E−223 |
| Myroides odoratimimus | TonB-dependent receptor | 100 | 389 | 1.80E−222 |