Table 1.

Leads identified by GWAS analysis of maize dry grind ethanol traits. The chromosome location of each lead is based on the maize V2 genome. The traits are described in electronic supplementary material, table S1.

Gramene ID	linkage group	trait	description	begin	end	F	p-value	NegLogP
GRMZM2G012874	8	DG72P	beta3-glucuronyltransferase, uncharacterized protein	131688249	131694614	28.9817	1.29 × 10−7	6.8903
GRMZM2G029912	9	DG24P	uncharacterized protein	105190710	105197290	25.9833	5.46 × 10−7	6.2628
GRMZM2G034302	1	DG48P	uncharacterized protein	15069803	15075192	28.0265	2.04 × 10−7	6.6911
GRMZM2G035741	6	OIL_P	uncharacterized protein	35892952	35896625	26.2301	4.85 × 10−7	6.3147
GRMZM2G056600	7	DG72P	uncharacterized protein	129263776	129265926	25.2905	7.64 × 10−7	6.1168
GRMZM2G066460	6	OIL_P	60S acidic ribosomal protein P0	9203729	9206286	25.3335	7.48 × 10−7	6.1259
GRMZM2G074604	5	OIL_P	phenylalanine ammonia-lyase	186677004	186680745	30.1549	7.35 × 10−8	7.134
GRMZM2G089454	5	OIL_P	uncharacterized protein	204908277	204911697	27.8408	2.23 × 10−7	6.6523
GRMZM2G097884	5	OIL_P	uncharacterized protein	190953138	190954236	28.171	1.90 × 10−7	6.7212
GRMZM2G108474	5	STC_P	translationally controlled tumour protein homologue	68020016	68022909	24.8886	9.29 × 10−7	6.0319
GRMZM2G114127	5	OIL_P	uncharacterized protein	184393704	184395078	28.9527	1.31 × 10−7	6.8842
GRMZM2G122076	4	OIL_P	putative homeobox DNA-binding and leucine zipper domain family protein	77609764	77614223	28.8919	1.34 × 10−7	6.8716
GRMZM2G137930	6	OIL_P	soluble inorganic pyrophosphatase, uncharacterized protein	35680626	35684863	28.1908	1.88 × 10−7	6.7254
GRMZM2G142093	5	DEN_N	uncharacterized protein	53179092	53180352	27.3245	2.86 × 10−7	6.5443
GRMZM2G145573	8	DG48P	catalytic/oxidoreductase acting on NADH or NADPH	87238606	87243400	27.6341	2.46 × 10−7	6.6091
GRMZM2G152041	6	DG72P	uncharacterized protein	71014229	71016297	25.8101	5.94 × 10−7	6.2263
GRMZM2G152764	5	RFA_P	no description	18698735	18701561	25.5729	6.66 × 10−7	6.1763
GRMZM2G155662	6	DG72P	single-stranded DNA-binding protein WHY1, chloroplastic	71618436	71621497	26.5803	4.09 × 10−7	6.3882
GRMZM2G163296	1	DG72P	putative uncharacterized protein	283309246	283311287	26.6681	3.92 × 10−7	6.4067
GRMZM2G169114	6	OIL_P	uncharacterized protein	104848940	104858629	25.4782	6.98 × 10−7	6.1564
GRMZM2G431900	7	DG72P	uncharacterized protein	22154867	22161180	26.8555	3.58 × 10−7	6.446
GRMZM2G540538	5	OIL_P	adenosine kinase 2, uncharacterized protein	186517098	186522957	30.5717	6.02 × 10−8	7.2203