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. 2017 Aug 22;7:9034. doi: 10.1038/s41598-017-08690-8

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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A schematic overview of changes in transcript abundance in the middle internode compared to the upper internode. The log2 transformed FPKM values were imported into MapMan software to generate the overview of general metabolism in the middle internode (MI) compared to the upper internode (UI). DEGs are represented by colored squares and grouped according to functional annotation based on MapMan ontology. The fold change of DEGs is indicated by the scale bar. Red indicates up-regulation, whilst blue indicates down-regulation.