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. 2017 Aug 22;17:579. doi: 10.1186/s12879-017-2671-7

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — Neighbour-Joining Tree based on all isolates with any resistance to first-line drug in Chad. Individual spoligotypes, DST data and resistance-conferring mutations were taken into consideration. The asterisks (*) indicate the strains that were selected for pncA sequencing and the colour indicates all MDR for MIRU