Table 1.

Summarized pooled genotyping for PTPRZ1

No.	SNP ID	Position	Distance to next SNP (bases)	Nucleotide changeb	Minor allele frequencya		Difference	χ2	P
					Cases	Controls
1	rs2215572	121064040		G/A	0.466	0.485	−0.019	0.84	0.36
2	rs740965	121068064	4024	G/T	0.165	0.143	0.022	2.53	0.11
3	rs1206504	121121853	53789	G/A	0.446	0.425	0.021	1.92	0.17
4	rs12706383	121124481	2628	C/T	0.089	0.099	−0.010	1.34	0.25
5	rs1196511	121161514	37033	T/C	0.359	0.337	0.021	1.36	0.24
6	rs6466811	121165045	3531	A/G	0.129	0.125	0.003	0.07	0.80
7	rs4629793	121170753	5708	A/G	0.383	0.357	0.026	1.99	0.16
8	rs1196513	121176314	5561	C/T	0.399	0.449	−0.050	6.97	0.008
9	rs13241278	121181151	4837	C/T	0.478	0.510	−0.041	4.60	0.03
10	rs1196471	121189416	8265	C/T	0.328	0.392	−0.064	13.46	0.0002
11	rs1196474	121196863	7447	C/T	0.117	0.120	−0.003	0.00	0.97
12	rs1196475	121203726	6863	T/C	0.364	0.393	−0.029	2.17	0.14
13	rs1206385	121213098	9372	A/G	0.317	0.292	0.025	1.93	0.17
14	rs1147502	121215433	2335	T/G	0.463	0.501	−0.038	3.84	0.05
15	rs1147498	121225025	9592	C/A	0.167	0.183	−0.016	2.68	0.10
16	rs1147489	121233636	8611	G/A	0.250	0.274	−0.023	1.91	0.17
17	rs1147487	121239221	5585	C/T	0.400	0.424	−0.024	1.58	0.21
18	rs1206358	121244523	5302	T/A	0.422	0.396	0.026	1.90	0.17
19	rs1206363	121250046	5523	A/G	0.349	0.329	0.020	1.59	0.21

Abbreviation: SNP, single-nucleotide polymorphism.

^aMinor allele frequencies in pools of 648 subjects with schizophrenia and 712 controls.

^bMinor allele presented first.