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. 2017 Aug 22;18:649. doi: 10.1186/s12864-017-4055-1

Table 1.

Summary of sequences analysis in Cerasus sachalinensis roots

Sample Raw Reads Clean reads Clean bases Error(%) Q20(%) Q30(%) GC(%)
CK_0h_1 46,798,272 44,621,416 6.69G 0.02 95.18 89.01 46.95
CK_0h_2 45,107,014 43,159,672 6.47G 0.02 95.31 89.26 46.96
CK_0h_3 45,874,828 44,106,108 6.62G 0.02 95.5 89.54 46.63
WL_3h_1 54,417,084 52,087,158 7.81G 0.02 95.14 88.93 45.63
WL_3h_2 45,655,674 43,708,280 6.56G 0.02 95.1 88.87 45.74
WL_3h_3 53,722,372 51,549,180 7.73G 0.02 95.34 89.27 46.09
WL_6h_1 53,385,772 50,952,524 7.64G 0.02 95.05 88.81 46.39
WL_6h_2 57,430,360 54,787,486 8.22G 0.02 94.91 88.53 45.75
WL_6h_3 53,239,000 51,043,882 7.66G 0.02 95.34 89.3 46.96
WL_24h_1 49,054,868 46,282,834 6.94G 0.02 95.52 89.59 46.34
WL_24h_2 57,973,622 54,699,464 8.2G 0.03 94.52 87.62 47
WL_24h_3 54,545,036 51,479,552 7.72G 0.02 95.32 89.23 46.3
Sumary 617,203,902 588,477,556 88.26G

Q20: The percentage of bases with a Phred value >20

Q30: The percentage of bases with a Phred value >30

GC GC content