Table 1.
PDB ID | Ligand ID | Npkt | Naligned | TM-Score | P-value (Pocket) | Npred | Nhit | |
---|---|---|---|---|---|---|---|---|
PKT1 | 3V5L | 0G1 | 15 | 15 | 0.27 | 0.001 | 5 | 1 |
4BDK | RQQ | 12 | 12 | 0.25 | 0.008 | 10 | 3 | |
1QCA | FUA | 12 | 11 | 0.33 | 0.003 | 8 | 0 | |
PKT2 | 4YKA | TYC | 12 | 11 | 0.36 | 0.002 | 11 | 0 |
4J93 | 0OE | 10 | 10 | 0.30 | 0.0003 | 10 | 2 | |
PKT3 | 2XZG | VH1 | 13 | 12 | 0.61 | N/A | 5 | 0 |
4G55 | VH2 | 12 | 11 | 0.61 | N/A | 3 | 0 | |
PKT4 | 4MSL | 2ET | 15 | 11 | 0.50 | N/A | 4 | 1 |
Npkt: Number of the template PDB amino acids in contact with its ligand.
Naligned: Number of the amino acids that are aligned to Myocilin’s structure.
Npred: Number of predictions from the NCI diversity set.
Nhit: Number of cases showing a positive thermal shift.