Table 5.
Best candidate RGs for normal and malignant prostate tissues according to Fig. 5a and ranked by CV
| Transcript_id | CV (%) | Mean RPMM | Gene | Description |
|---|---|---|---|---|
| ENST00000510199.5 | 8.95 | 99.8 | GNB2L1 | Guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 |
| ENST00000425566.1 | 9.91 | 127.3 | RPL23AP87 | Ribosomal protein L23a pseudogene 87 |
| ENST00000314138.10 | 10.52 | 134.9 | RPL27A | Ribosomal protein L27a |
| ENST00000412331.6 | 11.18 | 108.1 | EIF3L | Eukaryotic translation initiation factor 3 subunit L |
| ENST00000494591.1 | 11.49 | 78.4 | RPSAP36 | Ribosomal protein SA pseudogene 36 |
| ENST00000519807.5 | 11.5 | 168.1 | RPS20 | Ribosomal protein S20 |
| ENST00000356769.7 | 11.58 | 92.8 | NACA | Nascent polypeptide-associated complex alpha subunit |
| ENST00000496593.5 | 12.28 | 253.5 | RPLP0P2 | Ribosomal protein, large, P0 pseudogene 2 |
| ENST00000338970.10 | 12.63 | 176.9 | RPL14 | Ribosomal protein L14 |
| ENST00000610672.4 | 12.74 | 244 | MED22 | Mediator complex subunit 22 |
| ENST00000395957.6 | 12.97 | 95.5 | YWHAZ | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta |
| ENST00000234831.9 | 13.69 | 108.1 | TMEM59 | Transmembrane protein 59 |
| ENST00000353047.10 | 14.01 | 156.1 | CTSB | Cathepsin B |
| ENST00000556083.1 | 14.36 | 137.5 | ACTN1 | Actinin, alpha 1 |
| ENST00000558264.5 | 14.59 | 129.8 | TPM1 | Tropomyosin 1 (alpha) |
| ENST00000394621.6 | 14.87 | 189.2 | STEAP2 | STEAP2 metalloreductase |
| ENST00000335508.10 | 15.15 | 116 | SF3B1 | Splicing factor 3b subunit 1 |
| ENST00000341423.9 | 15.26 | 134.4 | HMGB1 | High mobility group box 1 |
| ENST00000564521.6 | 15.84 | 167 | ALDOA | Aldolase, fructose-bisphosphate A |
| ENST00000398752.10 | 16.45 | 200.6 | ATP5A1 | ATP synthase, H + transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle |
| ENST00000264657.9 | 16.84 | 137.7 | STAT3 | Signal transducer and activator of transcription 3 (acute-phase response factor) |
| ENST00000357214.5 | 17.4 | 105.5 | SFPQ | Splicing factor proline/glutamine-rich |
| ENST00000456530.6 | 17.44 | 118.5 | RPL15 | Ribosomal protein L15 |
| ENST00000495596.5 | 17.64 | 164.2 | ATP5G2 | ATP synthase, H + transporting, mitochondrial Fo complex subunit C2 (subunit 9) |
| ENST00000391959.5 | 17.67 | 125.6 | PPP1R12B | protein phosphatase 1 regulatory subunit 12B |
| ENST00000369936.2 | 17.97 | 235 | KIAA1324 | KIAA1324 |
| ENST00000300619.11 | 19.01 | 104.5 | ZNF91 | Zinc finger protein 91 |
| ENST00000401722.7 | 19.21 | 156.4 | SLC25A3 | Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 |
| ENST00000618621.4 | 19.43 | 405.9 | LPP | LIM domain containing preferred translocation partner in lipoma |
| ENST00000249822.8 | 19.53 | 107.3 | ARPP19 | cAMP regulated phosphoprotein 19 kDa |
| ENST00000353411.10 | 19.68 | 122.8 | SKP1 | S-phase kinase-associated protein 1 |
| ENST00000375856.4 | 19.76 | 151.8 | IRS2 | Insulin receptor substrate 2 |
| ENST00000373316.4 | 19.79 | 118.1 | PGK1 | Phosphoglycerate kinase 1 |
| ENST00000306085.10 | 19.9 | 159.2 | TRIM56 | Tripartite motif containing 56 |
| ENST00000357308.8 | 20 | 105 | GFPT1 | Glutamine–fructose-6-phosphate transaminase 1 |
They were obtained with CV < 20% and minimum counted reads of 30,000. Transcript_id: human transcript identifiers in ENSEMBL database