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. Author manuscript; available in PMC: 2018 Jun 1.
Published in final edited form as: J Virol Methods. 2017 Feb 24;244:32–38. doi: 10.1016/j.jviromet.2017.02.013

Table 1.

LAMP primer sequences.

Primer name Sequence
F3-1 AGTATCTACTACCACAATATCGG
B3-1 CCATGATGCTTGATGCAATA
FIP-1 AGTCGGATAAGGCAATTTTCCGTCTCATTGAAAGAGAAAGAGTTG
BIP-1 GTTCAAACACTTTGTGAAGCTCTGCACGTTCCGTAACTACCAT
Loop-B GGTCTTGCTAAAGCATTTCCTAGC
F3-18 ACITTCGGAAAATTGCCTTA
B3-18 ICTAAATGCAAGATTGTATTTCTCT
FIP-18 TACCATCATATTGCTAGGAAATGCTCCGACTCGCAATGTTCAA
BIP-18 GAAAGCTTATTGCATCAAGCATCAAICTACTCCCTCTAACTGT
LoopA-18 GCIAACAGAGCTTCACAAAGTGT
LoopB-18 TGGCACCACICAIGTGATGA
F3-29 TTATCCGACTCGCAATGT
B3-29 ICTAAATGCAAGATTGTATTTCTCT
FIP-29 CCGTAACTACCATCATATTGCTAGGCAAACACTTTGTGAAGCTCTG
BIP-29 CGTGAICAAAAAGAAAGCTTATTGCAICTACTCCCTCTAACTGT
LoopA-29 GCTTTAGCAAGACCATCAGCIAA
LoopB-29 ATCAAGCATCATGGCACCAC

Primer sets compared against the ZEBOV alignment, any nucleotide that was divergent from the primer sequence in >1/143 sequences was replaced with an inosine residue. 3 primer sets with perfect identity to >99% of the ZEBOV isolates in the LANL alignment.