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. 2017 Aug 23;7:9230. doi: 10.1038/s41598-017-08043-5

Table 1.

Sequence identity and similarity between different metazoan miRNA-class AGOs (upper table) and siRNA-class AGOs (lower table).

Identity-Similarity (%) Hsa-Ago2 Amis-Ago2 Cel-ALG1 Asu-ALG1 Dme-Ago1 Bmo-Ago1 Ami-Ago1 Nve-Ago1 Aqu-Ago1
Hsa-Ago2 x
Ami-Ago2 94–94 x
Cel-ALG1 60–67 57–65 x
Asu-ALG1 60–68 58–66 79–84 x
Dme-Ago1 64–72 63–69 60–70 63–72 x
Bmo-Ago1 69–77 67–74 61–71 64–72 81–85 x
Ami-Ago1 67–78 65–76 55–65 56–65 58–67 63–72 x
Nve-Ago1 66–77 64–75 54–66 55–66 58–68 63–73 75–84 x
Aqu-Ago1 59–70 55–66 55–66 56–68 58–68 60–71 56–67 56–67 x
Identity-Similarity (%) Dme-Ago2 Bmo-Ago2 Cel-RDE1 Cel-ERGO1 Asu-ALG5 Asu-ALG7 Ami-Ago2 Nve-Ago2 Aqu-Ago2
Dme-Ago2 x
Bmo-Ago2 23–36 x
Cel-RDE1 13–22 14–29 x
Cel-ERGO1 14–27 14–26 13–26 x
Asu-ALG5 18–29 20–34 19–35 19–36 x
Asu-ALG7 18–29 20–34 20–35 19–33 41–56 x
Ami-Ago2 9–13 10–18 10–18 8–15 9–16 12–20 x
Nve-Ago2 21–33 22–34 15–30 14–26 21–33 20–31 18–23 x
Aqu-Ago2 19–29 23–35 17–31 16–31 27–41 26–39 17–25 29–40 x

The miRNA-class AGO sequences used are of Homo sapiens (chordate, Hsa-Ago2), Alligator mississippiensis (chordate, Ami-Ago2), Caenorhabditis elegans (nematode, Cel-ALG1), Ascaris suum (nematode, Asu-ALG1), Drosophila melanogaster (insect, Dme-Ago1), Bombyx mori (insect, Bmo-Ago1), Acropora millepora (cnidarian, Ami-Ago1), Nemastella vectensis (cnidarian, Nve-Ago1), and Amphimedon queenslandica (sponge, Aqu-Ago1). The siRNA-class AGOs used are of C. elegans (nematode, Ce-RDE1 and Ce-ERGO1), A. suum (nematode, Asu-ALG5 and Asu-ALG7), D. melanogaster (insect, Dme-Ago2), B. mori (insect, Bmo-Ago2), A. millepora (cnidarian, Ami-Ago2), N. vectensis (cnidaria, Nve-Ago2) and A. queenslandica (sponge, Aqu-Ago2). In each cell, the first number corresponds to the percentage of sequence identity, while the second value stands for the percentage of sequence similarity.