Table 1:

Benchmark run times of the Bio-Docklet pipeline containers with the CHIPseq and RNAseq pipelines, using as input large-scale NGS data downloaded from public databases

	CHIP-seq (total: 31 GB)	RNAseq (total: 43 GB)
Dataset location	• http://www.ebi.ac.uk/ena/data/view/ERR411994	• http://www.ebi.ac.uk/ena/data/view/SRR1797219 (cancer cells) • http://www.ebi.ac.uk/ena/data/view/SRR1797228 (healthy cells)
Dataset details	• ERR411994.fastq 192 465 714 single-end reads	• SRR1797219_1.fastq - 47 209 075 forward reads, cancer cells • SRR1797219_2.fastq - 47 209 075 reverse reads, cancer cells • SRR1797228_1.fastq - 47 697 722 forward reads, healthy cells • SRR1797228_2.fastq - 47 697 722 reverse reads, healthy cells
Running times (HH:MM:SS)
Lab server	7:16:34	20:10:38
AWS	6:09:16	16:50:11