Table 1:
Raw data | Clean data | |||||||
---|---|---|---|---|---|---|---|---|
Insert size (bp) | Library | Reads length (bp) | Total data (Gb) | Sequence coverage (×) | Physical coverage (×) | Total Data (Gb) | Sequence coverage (×) | Physical coverage (×) |
250 | 1 | 150 | 54.16 | 27.78 | 23.15 | 41.99 | 23.15 | 20.32 |
500 | 1 | 150 | 54.67 | 28.04 | 46.73 | 39.27 | 46.73 | 39.5 |
S800 | 1 | 150 | 15.68 | 8.04 | 21.45 | 11.82 | 21.45 | 18.31 |
2000 | 2 | 49 | 34.93 | 17.92 | 365.62 | 13.99 | 7.18 | 146.48 |
5000 | 2 | 49 | 34.35 | 17.62 | 899.1 | 13.60 | 6.97 | 355.83 |
10 000 | 2 | 49 | 33.74 | 17.3 | 1765.7 | 9.48 | 4.86 | 496.14 |
20 000 | 2 | 49 | 30.64 | 15.71 | 3207.13 | 3.25 | 1.66 | 340.01 |
40 000 | 2 | 49 | 32.68 | 16.76 | 6842.73 | 3.33 | 1.71 | 697.58 |
Total | 13 | - | 290.85 | 149.17 | 13 171.61 | 136.73 | 70.12 | 2114.17 |
Coverage calculation was based on the estimated genome size of 1.95 Gb. Sequence coverage is the average number of times a base is read, while physical coverage is the average number of times a base is spanned by mate-paired reads.