Table 3:
Species | Common name | Sequencing platform | Sequence coverage (×) | Assembled genome size (Gb) | Contig N50 (kb) | Scaffold N50 (kb) | Gap ratio (%) | Gene number | Reference |
---|---|---|---|---|---|---|---|---|---|
Alligator mississippiensis | American alligator | NGS | 156.0 | 2.17 | 7.0 | 509 | 2.09 | 23 323 | [40] |
Alligator sinensis | Chinese alligator | NGS | 109.0 | 2.30 | 23.4 | 2188 | 3.17 | 22 200 | [41] |
Anolis carolinensis | Green anole lizard | Sanger | 6.0 | 1.78 | 79.9 | 4033 | 4.49 | 17 472 | [42] |
Chrysemys picta bellii | Western painted turtle | Sanger + NGS | 18.0 | 2.59 | 11.9 | 5212 | 7.64 | 21 796 | [43] |
Chelonia mydas | Green sea turtle | NGS | 82.3 | 2.24 | 20.4 | 3778 | 4.33 | 19 633 | [44] |
Crocodylus porosus | Saltwater crocodile | NGS | 74.0 | 2.12 | 32.8 | 205 | 5.30 | 13 321 | [40] |
Deinagkistrodon acutus | Five-pacer viper | NGS | 114.2 | 1.47 | 22.4 | 2122 | 5.29 | 21 194 | [45] |
Eublepharis macularius | Leopard gecko | NGS | 135.8 | 2.02 | 20.0 | 664 | 1.76 | 24 755 | [26] |
Gavialis gangeticus | Indian gharial | NGS | 81.0 | 2.88 | 14.2 | 127 | 2.22 | 14 043 | [40] |
Gekko japonicus | Japanese gecko | NGS | 131.3 | 2.55 | 21.1 | 685 | 3.54 | 22 487 | [46] |
Ophiophagus hannah | King cobra | NGS | 28.0 | 1.66 | 4.0 | 226 | 13.5 | 18 579 | [19] |
Pelodiscus sinensis | Soft-shell turtle | NGS | 105.6 | 2.21 | 21.9 | 3331 | 4.35 | 23 649 | [44] |
Pogona vitticeps | Australian dragon lizard | NGS | 179.1 | 1.82 | 31.3 | 2290 | 3.78 | 19 406 | [20] |
Python molurus bivittatus | Burmese python | NGS | 20.0 | 1.44 | 10.7 | 208 | 3.52 | 25 385 | [18] |
Shinisaurus crocodilurus | Chinese crocodile lizard | NGS | 149 | 2.24 | 11.7 | 1470 | 7.98 | 20 150 |