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. 2017 Jun 8;6(7):1–6. doi: 10.1093/gigascience/gix041

Table 4:

The percentages of complete, fragmented, and missing genes out of the 2586 expected vertebrata genes in 15 reptile genomes based on the BUSCO assessment

Species Common name Complete single-copy (%) Complete duplicated (%) Fragmented (%) Missing (%)
Alligator mississippiensis American alligator 95.0 0.6 3.1 1.3
Alligator sinensis Chinese alligator 94.4 0.7 3.2 1.7
Anolis carolinensis Green anole lizard 88.1 0.8 5.6 5.5
Chelonia mydas Green sea turtle 93.9 0.8 3.7 1.6
Chrysemys picta bellii Western painted turtle 75.5 0.8 3.3 20.4
Crocodylus porosus Saltwater crocodile 94.1 0.6 2.1 3.2
Deinagkistrodon acutus Five-pacer viper 94.5 0.6 2.4 2.5
Eublepharis macularius Leopard gecko 94.0 1.2 3.3 1.5
Gavialis gangeticus Indian gharial 85.2 0.5 11.6 2.7
Gekko japonicus Japanese gecko 89.8 1.1 6.3 2.8
Ophiophagus hannah King cobra 86.6 0.6 8.6 4.2
Pelodiscus sinensis Soft-shell turtle 93.5 0.5 3.8 2.2
Pogona vitticeps Australian dragon lizard 94.3 0.6 3.1 2.0
Python molurus bivittatus Burmese python 91.0 0.7 5.4 2.9
Shinisaurus crocodilurus Chinese crocodile lizard 91.6 0.9 4.8 2.7