Table 1.
Variable site | 6 | 9 | 24 | 45 | 51 | 81 | 117 | 126 | 129 | 138 | 225 | 261 | 267 | 288 | 348 | 366 | 384 | 387 | 390 | 459 | 468 | 495 | 498 | 501 | 508 | 516 | 525 | 582 | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Region | Haplo-type | Frequ-ency | GenBank accession no. | T | A | A | T | A | A | A | G | T | C | T | A | G | C | C | A | A | T | T | T | A | A | A | T | T | C | A | G |
NW | Hap_1 | 4.92% | MF167270 | . | . | . | . | . | G | . | . | . | T | . | . | A | . | . | . | G | . | C | C | T | G | . | C | C | T | . | A |
Hap_2 | 1.23% | MF167271 | . | . | G | . | . | G | . | . | . | T | . | . | A | . | . | . | G | . | C | C | T | G | . | C | C | T | . | A | |
NE | Hap_3 | 29.92% | MF167272 | . | . | . | . | G | . | . | . | . | T | . | G | . | . | T | . | G | . | . | C | T | G | G | . | C | T | G | . |
Hap_4 | 9.02% | MF167273 | . | . | . | . | G | . | . | . | . | . | . | G | . | . | T | . | G | . | . | C | T | G | G | . | C | T | G | . | |
Hap_5 | 1.23% | MF167274 | . | . | . | . | G | . | . | . | . | T | C | . | . | . | T | . | G | . | . | C | T | . | G | . | C | T | G | . | |
Hap_6 | 1.64% | MF167275 | . | . | . | . | G | . | . | . | . | T | . | . | . | . | T | . | G | . | . | C | T | G | G | . | C | T | G | . | |
SP | Hap_7 | 0.82% | MF167276 | . | G | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . |
Hap_8 | 44.67% | MF167277 | . | G | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | |
Hap_9 | 1.64% | MF167278 | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | |
Hap_10 | 0.41% | MF167279 | . | G | . | . | . | . | G | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | |
Hap_11 | 2.46% | MF167280 | . | . | . | . | . | . | G | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | |
Hap_12 | 0.41% | MF167281 | . | G | . | . | . | . | G | . | C | . | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | |
Hap_13 | 0.41% | MF167282 | . | G | . | . | . | . | G | A | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . | |
Hap_14 | 0.41% | MF167283 | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | |
Hap_15 | 0.82% | MF167284 | C | . | . | C | . | . | G | . | . | T | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Unique nucleotide positions which separate the Northern and Southern Hemispheres, the Northwest Pacific from the others and the Northeast Pacific from others were represented in bold, italic and underlined text, respectively (NW = Northwest Pacific; NE = Northeast Pacific; SP = South Pacific).