All-atom MD simulations reveal how the myristoyl
group anchors
recoverin to a PC:PG (4:1) membrane. (A) Snapshots capturing the fast
process of myristoyl insertion. The myristoyl moiety is displayed
in blue-violet, while the two N-terminal helices A and B of recoverin
are highlighted in orange and blue, respectively. (B) Snapshot obtained
at the end of a 1 μs trajectory, showing the membrane-embedded
myristoyl group (violet) and five positively charged residues (red)
reported by previous NMR measurements11 to interact with the membrane. (C) Membrane orientation of recoverin
during the course of a 1 μs trajectory described in terms of
the distances of the two calcium ions to the membrane. On average,
the protein exhibits a tilted orientation toward the lipid bilayer,
with one calcium closer to the membrane surface than the other one.
Importantly for the biological function of recoverin, the binding
pocket for RK remains accessible during the trajectory. (D) Relative
proportions rcon of simulation time that
each of the basic residues of recoverin spent in contact with the
membrane, i.e., at a distance <0.6 nm (for details see Table S1).