Skip to main content
. 2017 Aug 25;12(8):e0183209. doi: 10.1371/journal.pone.0183209

Table 2. Primers applied in this study.

Gene codes Amplicon length (bp) Forward primer (5'-3') Reverse primer (5'-3') Putative functions (for ESTs) Notes
ESTs
 Lf108 361–363 AGGATTTCTCGAGGACCTAC AATCCCAATTTGTATTGCAC pectinesterase/pectinesterase inhibitor GW590174.1
 Lf207 343–403 ACCCTTTTGTTCCACACGAG AGATTCCCACTGTCCCTGTCT cytochrome P450-like TBP protein GW591169.1
 Lf210 302–324 GGGCATTTCATTTTCCCTTT GAGTACCCACAGGGGTCAAA S-adenosyl methionine decarboxylase GW591158.1
 Lf212 279–286 GCTCCCCATCACAGTTTCTC CCACAGGGGTCAAAGTCAAA S-adenosyl methionine decarboxylase GW591146.1
 Lf218 266 CTGCTCCTGAAGGAATCCAA GGCTTCGAGACCAACATCAC LLP-B3 protein GW591136.1
 Lf219 256–299 CTAGGCATCACACCCAAATG TCCTGATGAAGTCGCTGATG isopentenyl diphosphate isomerase II (IPI2) GW591124.1
 Lf224 275–299 CTCCTCAATCGGCACATTCT CAGGGGACTCTCTCTCAGGA sugar carrier protein GW591114.1
 Lf229 303 CTGCTCCTGAAGGAATCCAA CGTCGAGGGTCGTGTCTACT LLP-B3 protein GW591080.1
 Lf230 326 CCATGAGTGGAGTGACATGC CACACGCTGGACTTCACATT beta-tubulin GW591069.1
 LL02 526–545 CTCGAGAGAGAGGCCAGATG CCTCTCTTCCATGCCCATTA pentatricopeptide repeat-containing protein DN985104.1
 LL17 527 TCTGGAAGTTCTGCCCCTTA CATCAAACTCCCTCCTCGAC leucine-rich repeat receptor protein kinase MSP1-like DN985157.1
 LL19 353–496 CAAACCCTTAAACCGCATTG CAAACCAGTCATTCCCCTGT fatty acid desaturase DN985108.1
 LL21 539–545 GAGACCCGGCACTGTAAGAC TGCTGCCAACAAGATAGCAC hypothetical protein DN985137.1
 LL22 531–536 ATACCAGCAAACTGGGATGC TCCTTGAGCACAATGAAATCTG U-box domain-containing protein DN985128.1
 LL25 532–533 TCCGTCTTCCACTTCAGGAT CACCAACAGCAACAGTCTGG elongation factor 1-alpha DR992640.1
 LL39 508–539 GACCACCAAAATGTGCAAAA AGATCAAGAGTCGCCGAAAC pollen preferential protein DN985087.1
 LL50 493 AGCCAGCAAAGGAATTCTGA AATTCTCCTCCCCGACATTT subtilisin-like protease DN985130.1
 LL89 490–491 TTGTTCCACACGAGATTTCTGTT GACAAGGGGAATCCGACTGT cytochrome P450-like TBP protein GR882236.1
 LL106 219–220 CAGACTACAATTGAGATYGACTCC ATCAGGGTTGATGCTCTTGC heat shock protein 70 BP177599.1
 LL107 320 AAGGAGCTTGGGACTGTRATGC CCTCACTTGGCCATCATGAC calmodulin FP052101.1
cpDNA
rbcL 500 CGCGGTGGACTTGATTTTACC GGCATATGCCAAACATGAATACC (Arzate-Fernández AM et al., 2005)
psbC-trnS 1467–1470 GGTCGTGACCAAGAAACCAC GGTTCGAATCCCTCTCTCTC (Arzate-Fernández AM et al., 2005)
trnT-trnL 785–818 CAAATGCGATGCTCTAACCT AGTCCGTAGCGTCTACCGAT (Nishikawa et al., 2002)
trnL-trnF 250–251 TCCGTCGACTTTATAAGTCGTG TGCCAGGAACCAGATTTGAACT (Nishikawa et al., 2002)
atpB-rbcL 637–643 GAAGTAGTAGGATTGGTTCTCA CCAACACTTGCTTTAGTTTC (Nishikawa et al., 2002)
petA 605–606 CCCATTTTTGCACAGCAGGGTTATG CCCTCKGAAACAAGAAGTT (Grivet et al., 2001)
ycf4 391–392 GGCCYCGGATTTCCATATAAAG TGGCGATCAGAACAYATATGGATAG (Grivet et al., 2001)
psbB 628–629 GGATTRCGTATGGGMAATATTGAAAC CCAAAAGTRAACCAACCCCTTGGAC (Graham and Olmstead, 2000)
nrITS 694–704 GGAAGTAAAAGTCGTAACAAGG TCCTCCGCTTATTGATATGC (Peterson et al., 2004)