Table 1.
Identification of proteins #1–35 by Orbitrap Velos or Q Exactive mass-spectrometer.
Spot | Protein | Accession No | Symbol | MWa) | p1b) | Peptidesc) | % coveraged) |
---|---|---|---|---|---|---|---|
1 | Collagen 1 alpha-2 chain | NP_031769 | Col1A2 | 129.6 | 9.3 | 7 | 5.9 |
2 | Elongation factor 2 | NP_031933 | Eef2 | 95.3 | 6.4 | 14 | 14.0 |
3 | Moesin | NP_034963 | Msn | 66.5 | 5.9 | 51 | 70.9 |
Caldesmon-1 | NP_663550 | Cald1 | 60.5 | 7.0 | 46 | 69.2 | |
4 | Dihydropyrimidinase-like 3 | NP_001129558 | Dpysl3 | 61.9 | 6.0 | 12 | 26.4 |
5 | Serine protease HTRA1 | NP_062510 | Htra1 | 51.2 | 7.8 | 22 | 45.0 |
6 | Serpin H1 | NP_001104514 | Serpinh1 | 46.5 | 8.9 | 13 | 30.0 |
7 | Serine-threonine kinase receptor-associated protein | NP_035629 | Strap | 38.4 | 5.0 | 4 | 16.9 |
8 | Tropomyosin 3 | NP_071709 | Tpm3 | 32.8 | 4.2 | 26 | 60.2 |
9 | 14-3-3 protein epsilon | NP_033562 | Ywhae | 29.2 | 4.6 | 28 | 74.9 |
10 | Protein-lysine6-oxidase | NP_034858 | Lox | 46.7 | 8.7 | 6 | 15.8 |
11 | Annexin A2 | NP_031611 | Anxa2 | 38.6 | 7.6 | 5 | 32.4 |
12 | Rho dissociation inhibitor 2 | NP_031512 | Arhgdib | 22.9 | 5.0 | 13 | 57.0 |
13 | Carbonic anhydrase 3 | NP_031632 | Car3 | 29.4 | 6.9 | 6 | 24.6 |
14 | Peptidyl-prolyl cis-trans isomerase C | NP_032934 | Ppic | 22.8 | 7.0 | 2 | 11.8 |
15 | Protein S100-A11 | NP_058020 | S100a11 | 11.0 | 5.3 | 6 | 51.0 |
16 | Phosphodiesterase 4D, cAMP-specific (Fragment) | NP_035186 | Pde4d | 84.5 | 4.8 | 2 | 2.3 |
17 | Protein S100-A13 | NP_033139 | S100a13 | 17.7 | 6.2 | 5 | 43.9 |
18 | Cytochrome c oxidase subunit 6B1 | NP_079904 | Cox6b1 | 10.1 | 9.0 | 2 | 11.6 |
19 | Protein S100-A6 | NP_035443 | S100a6 | 10.1 | 5.3 | 2 | 16.9 |
20 | Secernin-1 | NP_081544 | Scrn1 | 46.3 | 4.7 | 7 | 15.2 |
21 | Connective tissue growth factor | NP_034347 | Ctgf | 38.6 | 7.6 | 3 | 12.1 |
22 | Transgelin (SM-22) | NP_035656 | Tagln | 22.5 | 8.9 | 17 | 63.2 |
23 | Hemoglobin subunit beta-1 | NP_032246 | Hbb-b1 | 15.7 | 7.1 | 7 | 49.7 |
24 | Myosin, light polypeptide kinase | NP_647461 | Mylk | 213.6 | 5.9 | 14 | 15.2 |
Protein phosphatase 1 regulatory subunit 12A | NP_082168 | Ppp1r12a | 111.8 | 5.5 | 6 | 6.3 | |
25 | Myh11 protein | NP_038635 | Myh11 | 227.1 | 5.4 | 19 | 10.4 |
26 | Leucine zipper transcription factor-like 1 | NP_201579 | Lztfl1 | 34.7 | 5.1 | 6 | 21.5 |
27 | Sepiapterin reductase | NP_035597 | Spr | 27.9 | 5.9 | 6 | 37.4 |
Heat shock protein beta-1 | NP_038588 | Hspb1 | 23.0 | 6.1 | 5 | 31.4 | |
28 | Myosin regulatory light polypeptide 9 | NP_742116 | Myl9 | 19.9 | 4.8 | 6 | 33.7 |
29 | Cofilin-2 | NP_031714 | Cfl2 | 18.7 | 7.7 | 9 | 51.8 |
30 | Cofilin-1 | NP_031713 | Cfl1 | 18.6 | 8.2 | 8 | 51.8 |
31 | Prefoldin subunit 2 | NP_035200 | Pfdn2 | 16.5 | 6.2 | 7 | 45.5 |
32 | Fatty acid-binding protein, heart | NP_034304 | Fabp3 | 14.8 | 6.1 | 8 | 54.9 |
33 | Destrin | NP_062745 | Dstn | 18.5 | 8.1 | 8 | 49.1 |
34 | Glutathione S-transferase Mu | NP_034488 | Gstm1 | 26.0 | 7.7 | 11 | 47.2 |
35 | Mimecan (Osteoglycin) | NP_032786 | Ogn | 34.0 | 5.5 | 5 | 13.8 |
CPFP version 2.0.3 was used for database searching against the Uniprot mouse database.
Theoretical molecular weight (KDa).
Theoretical isoelectric point (pI).
Number of matched peptides.
Percentage of sequence coverage.