Table 1.
Gene | SNP | Genotype | Associated NAS phenotype | Annotation | CADD scorec | Allele frequencies |
||
---|---|---|---|---|---|---|---|---|
EA | Afr | Latino | ||||||
OPRM1 | rs1799971 | G allelea | Less likely to receive treatment; shortened length of stay | Missense Asn133Asp | 24.1 | 0.13 | 0.03 | 0.21 |
COMT | rs4680 | G allelea | Less likely to receive treatment with two or more medications; shortened length of stay | Missense Val158Met | 11.4 | 0.48 | 0.69 | 0.6 |
rs4680 | G alleleb | Less likely to receive treatment with two medications | 11.4 | |||||
rs740603 | A allelea | Less likely to receive pharmacological treatment; shortened length of stay | Intronic | 0.2 | 0.49 | 0.56 | 0.61 | |
rs740603 | A alleleb | Less likely to receive any pharmacological treatment | 0.2 | |||||
PNOC | rs351776 | A allelea | More likely to be treated with two medications; longer length of stay | Intronic | 1.3 | 0.44 | 0.78 | 0.69 |
rs351776 | A alleleb | More likely to receive treatment with two medications; longer length of stay | 1.3 | |||||
rs2614095 | A allelea | More likely to be treated with two medications | Intronic | 2.9 | 0.46 | 0.11 | 0.27 | |
rs4732636 | A allelea | Less likely to receive medication treatment | Upstream | 6.3 | 0.28 | 0.1 | 0.36 | |
OPRK1 | rs702764 | C allelea | More likely to receive treatment with two medications | Synonymous | 0.4 | 0.13 | 0.49 | 0.28 |
OPRD1 | rs204076 | A alleleb | More likely to receive treatment with two medications; longer length of stay | Downstream | 5.6 | 0.66 | 0.83 | 0.82 |
DRD2 | rs1799732 | Deletion | Less likely to require treatment with medication | Upstream | N/A | 0.1 | 0.5 | 0.12 |
aInfant allele.
bMaternal allele.
cCombined annotation-dependent depletion (17).
EA, European–American; Afr, African; N/A, not applicable (frame shift).