Table 1.
Gene descriptions and the corresponding primer sequences used for validation of RNA-seq results by RT-qPCR.
| Gene symbol | Tracking_id | Sequence(5′–3′) | References |
|---|---|---|---|
| Heat-shock protein Hsp20 (hsp18) | orf00243 | F-CGGTATCAGGAGTTTTGAGTTC | Beltramo et al., 2006 |
| R-CGTAGTAACTGCGGGAGTAATTC | |||
| Malate transporter | orf01583 | F-TTATCGGCATCTCAGTTCATACAGC | This work |
| R-CAGACAAAACCCCAAGACTATCACG | |||
| Membrane protein | orf00399 | F-TGGTCTTGGAACGGCATTAGGCGA | This work |
| R-ATCAGCAAATGAAGCACCGAGGGG | |||
| butA(acetoin reductase) | orf00591 | F-GGACTGATTGGTAGACATTTAGAA | This work |
| R-GCGTTTTGAGACATCGGCTTTTTT | |||
| F0F1 ATP synthase subunit gamma(ATPF1G) | orf00568 | F-ATTCGTCGTCGGATTGATTC | This work |
| R-CGAGATATCCGGACGTATGC | |||
| Molecular chaperone DnaK(dnaK) | orf01216 | F-CCGGTTTGAGCTTCTCTGAC | This work |
| R-CGGGTTAATCGAATGGTTTG | |||
| ATP dependent Clp protease proteolytic subunit (clpP) | orf00480 | F-CGGTACCAAAGGCAAGCGTTTTAT | Beltramo et al., 2006 |
| R-CTCTTCCGAGTCTTCAAAAGTTGAT | |||
| Citrate lyase(citE) | orf00341 | F-CCGCACGATGATGTTTGTTCC | Olguin et al., 2009 |
| R-GCTCAAAGAAACGGCATCTTCC | |||
| ATP-dependent protease(clpX) | orf01869 | F-TTTGTGGTAAACGCCAGGAT | Beltramo et al., 2006 |
| R-TGCTCATGCTCCAGTTCTTG | |||
| Nucleotide exchange factor GrpE(grpE) | orf01217 | F-CGCAGGCAGAAAAGAACAATC | Beltramo et al., 2006 |
| R-GCTGAAGACGAAGCAGTTGC | |||
| D-methionine transport system substrate-binding protein (metQ) | orf00953 | F-CAGTCGGTTCTCAAGGTTCC | This work |
| R-GCCCTGTGCTGTAGCCTTAT | |||
| D-lactate dehydrogenase(ldhD) | orf00332 | F-GCCGCAGTAAAGAACTTGATG | Margalef-Català et al., 2016 |
| R-TGCCGACAACACCAACTGTTT | |||
| DNA polymerase III subunit alpha(dpoIII) | orf00690 | F-GCAGTGAAGGGACGCTTAAACG | Costantini et al., 2011 |
| R-ACCCAATCGCCTCGACATCATC | |||
| DNA primase(dnaG) | orf00886 | F-TGTGGACGGAGTGGCAATGT | Desroche et al., 2005 |
| R-CGGTATTTTCTGTATATTTACTATCG | |||
| DNA gyrase subunit A(gyrA) | orf02027 | F-CGCCCGACAAACCGCATAAA | Desroche et al., 2005 |
| R-CAAGGACTCATAGATTGCCGAA | |||
| DNA gyrase subunit B(gyrB) | orf02026 | F-GAGGATGTCCGAGAAGGAATTA | Desroche et al., 2005 |
| R-GCCTGCTGGGCATCTGTATTA |