Table 2.
Major haplotypes in the CHGA promoter region in Indian population
NM_001275.3 was used as the reference sequence. Haplotype prediction in the CHGA promoter region was carried out using PHASE program. The alleles present at each of the eight loci for the haplotypes are indicated along with the frequency of occurrence of the haplotype in the population. 2n refers to the numbers of chromosomes analyzed.
| Haplotype |
Frequency in Indian population (2n = 1538) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| No. | −1106 | −1018 | −1014 | −988 | −462 | −415 | −89 | −57 | |
| 1 | G | A | T | T | G | T | C | C | 0.310 |
| 2 | G | T | T | T | G | C | C | T | 0.204 |
| 3 | G | A | C | G | A | T | A | C | 0.196 |
| 4 | A | A | T | T | G | T | C | C | 0.148 |
| 5 | G | A | T | T | G | C | C | C | 0.112 |