Table 1.
List of TaqMan assays used for quantitative polymerase chain reaction gene expression analysis
| Gene name | Gene symbol | Gene expression Assay ID | Assay location (RefSeq ID) | Amplicon length |
|---|---|---|---|---|
| Hypoxanthine phosphoribosyltransferase 1 | Hprt1 | Rn01527840_m1 | 673 (NM_012583.2) | 64 |
| SRY (sex determining region Y)-box 9 | Sox9 | Rn01751070_m1 | 1177 (XM_003750950.3) | 102 |
| Cartilage oligomeric matrix protein | Comp | Rn00563255_m1 | 1132 (NM_012834.1) | 87 |
| Matrix metallopeptidase 3 | Mmp3 | Rn00591740_m1 | 1379 (X02601.1) | 67 |
| Matrix metallopeptidase 9 | Mmp9 | Rn00579162_m1 | 2016 (NM_031055) | 72 |
| Matrix metallopeptidase 13 | Mmp13 | Rn01448194_m1 | 652 (NM_133530.1) | 65 |
| TIMP metallopeptidase inhibitor 1 | Timp1 | Rn01430873_g1 | 240 (NM_053819.1) | 118 |
| TIMP metallopeptidase inhibitor 2 | Timp2 | Rn00573232_m1 | 466 (NM_021989.2) | 70 |
| Cannabinoid receptor 1 | Cb1 | Rn02758689_s1 | 1235 (NM_012784.4) | 92 |
| Cannabinoid receptor 2 | Cb2 | Rn04342831_s1 | 847 (NM_020543.4) | 99 |
| N-acyl phosphatidylethanolamine phospholipase D | Napepld | Rn01786262_m1 | 1054 (NM_199381.1) | 71 |
| Phospholipase A2 | Pla2g2a | Rn00668379_g1 | 104 (NM_031598.3) | 79 |
| Phospholipase C, beta 1 | Plcb1 | Rn01514511_m1 | 729 (NM_001077641.1) | 58 |
| Glycerophosphodiester phosphodiesterase 1 | Gde1 | Rn00583529_m1 | 945 (NM_032615.2) | 71 |
| Fatty acid amide hydrolase | Faah | Rn00577086_m1 | 376 (NM_024132.3) | 63 |
| Prostaglandin-endoperoxide synthase 2 | Ptgs2 | Rn01483828_m1 | 312 (NM_017232.3) | 112 |
| Arachidonate 12-lipoxygenase | Alox12 | Rn01461082_m1 | 1210 (NM_001105798.1) | 79 |
| Arachidonate 15-lipoxygenase | Alox15 | Rn00696151_m1 | 144 (NM_031010.2) | 82 |