Table 1. The list of fungal genomes used for comparative analysis with C. truncatum sequenced in the present study (in bold).
Organism | Strain | Host | Origin | Accession no. | Ref. |
---|---|---|---|---|---|
C. truncatum | MTCC #3414 | Capsicum annuum | India | NBAU00000000 | - |
C. graminicola | M1.001 | Zea mays | USA | ACOD00000000.1 | [18] |
C. higginsianum | IMI 349063 | Brassica rapa | Trinidad & Tobago | LTAN00000000.1 | [19] |
C. orbiculare | MAFF 240422 | Cucumis sativus | Japan | AMCV00000000.1 | [20] |
C. fructicola (deposited as C. gloeosporioides) | Nara gc5 | Fragaria x ananassa | Japan | ANPB00000000.1 | [20] |
C. fioriniae | IMI 504882 | Fragaria x ananassa | New Zealand | JARH00000000.1 | [22] |
C. sublineola | TX430BB | Sorghum bicolor | USA | JMSE00000000.1 | [23] |
C. simmondsii | CBS 122122 | Carica papaya | Australia | JFBX00000000.1 | [26] |
C. salicis | CBS 607.94 | Salix species | Netherlands | JFFI00000000.1 | [26] |
C. nymphaeae | IMI 504889 | Fragaria x ananassa | Denmark | JEMN00000000.1 | [26] |
C. incanum | MAFF 238704 | Raphanus sativus | Japan | LFIW00000000.1 | [5] |
C. scovillei* | 1 | Capsicum annuum | South Korea | LUXP00000000.1 | [24] |
Verticillium alfalfa | VaMs.102 | Medicago sativa | USA | ABPE00000000.1 | [58] |
V. dahliae | VdLs.17 | Lactuca sativa | USA | ABJE00000000.1 | [58] |
Fusarium graminearum | PH1 | Triticum species | USA | AACM00000000.1 | [59] |
F. oxysporum | FOL 4287 | Solanum lycopersicum | Spain | AAXH00000000.1 | [59] |
F. verticillioides | 7600 | Zea mays | USA | AAIM00000000.2 | [59] |
Magnaporthe oryzae# | 70–15 | Oryza sativa | French Guiana | AACU00000000.3 | [60] |
M. oryzae | P131 | Oryza sativa | Japan | AHZT00000000.1 | [61] |
M. oryzae | Y34 | Oryza sativa | China | AHZS00000000.1 | [61] |
N. crassa | OR74A | - | USA | AABX00000000.3 | [62] |
Trichoderma reesei | QM6a | - | Solomon Islands | AAIL00000000.2 | [63] |
Botrytis cinerea | B05.10 | Unknown | Germany | ASM83294v1 | [64] |
Sclerotinia sclerotiorum | 1980 | Phaseolus vulgaris | USA | AAGT00000000.1 | [64] |
*Gene annotations were not available for further analyses at the time of writing this manuscript.
# The strain used for phylogenetic analysis.