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. 2017 Aug 28;37(18):e00125-17. doi: 10.1128/MCB.00125-17

TABLE 3.

Summary of the results of the Cox model in other cohorts

Study Platform Cancer type No. of samples
No. of genes selected by Lasso regularization using AICc P value (log rank) Corrected P value (false-discovery rate)
Total High risk Low risk
GSE32062 GPL6480 Ovarian 260 51 209 22 2.28E−11 2.62E−10
GSE30219 GPL570 Lung 289 230 59 21 4.04E−09 3.10E−08
GSE1456 GPL97 Breast 159 64 95 8 6.06E−09 3.98E−08
GSE22153 GPL6102 Skin 54 16 38 8 9.41E−09 5.41E−08
GSE22762 GPL97 Heme 30 1 29 6 7.24E−08 3.33E−07
GSE4412 GPL97 Brain 85 1 84 13 2.85E−07 1.09E−06
GSE4271 GPL97 Brain 77 10 67 20 3.41E−07 1.21E−06
GSE14333 GPL570 Colorectal 226 2 224 14 1.44E−06 4.74E−06
GSE4922 GPL96 Breast 242 19 223 8 1.53E−05 4.68E−05
GSE21501 GPL4133 Pancreas 102 67 35 9 3.12E−05 8.96E−05
GSE42669 GPL6244 Brain 55 1 54 2 4.43E−05 0.000119
GSE9195 GPL570 Breast 77 37 40 26 4.64E−05 0.000119
GSE3494 GPL97 Breast 234 185 49 7 7.61E−05 0.000184
GSE8842 GPL5689 Ovarian 82 48 34 30 0.000167 0.000384
GSE17260 GPL6480 Ovarian 110 56 54 2 0.000263 0.000576
GSE37418 GPL570 Brain 73 57 16 4 0.000428 0.000895
GSE1379 GPL1223 Breast 60 35 25 3 0.000843 0.001687
GSE13213 GPL6480 Lung 117 42 75 4 0.001022 0.001923
GSE32063 GPL6480 Ovarian 40 33 7 4 0.001045 0.001923
GSE17710 GPL9053 Lung 56 5 51 3 0.001087 0.001923
GSE9893 GPL5049 Breast 155 18 137 3 0.001171 0.001994
GSE18229 GPL887 Breast 53 1 52 4 0.001946 0.003197
GSE425 GPL317 Breast 22 15 7 6 0.005002 0.007669
GSE13041 GPL8300 Brain 49 46 3 4 0.007634 0.010973
GSE3 GPL10 Adrenal 32 18 14 6 0.015127 0.021087
GSE6532 GPL96 Breast 306 129 177 8 0.017094 0.023127
GSE18229 GPL885 Breast 13 1 12 2 0.019016 0.023769
GSE19234 GPL570 Skin 44 40 4 44 0.141582 0.155066
GSE4412 GPL96 Brain 85 84 1 4 0.280437 0.293184
GSE14814 GPL96 Lung 133 132 1 2 0.401377 0.410296