Table 4.
Comparison of UCBSV-induced genes corresponding to the over-represented GO terms ‘phosphorelay signal transduction system’ and ‘response regulator activity’ at 2 and 5 dag in Namikonga and Albert.
| Gene ID | Gene annotation | 2 dag | 5 dag | ||
|---|---|---|---|---|---|
| Albert | Namikonga | Albert | Namikonga | ||
| Log 2 FC (Adj.Pv) | Log 2 FC (Adj.Pv) | Log 2 FC (Adj.Pv) | Log 2 FC (Adj.Pv) | ||
| GO term: Phosphorelay signal transduction system (GO:0000160) and response regulator activity (GO:0000156) | |||||
| Cassava4.1_000395 m.g | Histidine kinase 2 | 0.1(1) | 1.3(6.2E-04) | −0.9(1) | 2.1(8.6E-14) |
| Cassava4.1_000859 m.g | CHASE domain containing histidine kinase protein | 0.1(1) | 2.6(3.3E-06) | −0.3(1) | 2.1(1.6E-11) |
| Cassava4.1_001670 m.g | Histidine kinase 2 | 0.8(1) | 4.7(1.6E-36) | 0.1(1) | 2.3(3.7E-18) |
| Cassava4.1_002119 m.g | Pseudo-response regulator 7 | 0.3(1) | 1.8(1.0E-07) | −0.1(1) | 0.8(3.8E-03) |
| Cassava4.1_002915 m.g | Response regulator 12 | 0.6(1) | 1.5(1.7E-05) | 0.1(1) | 2.4(1.1E-10) |
| Cassava4.1_015446 m.g | Response regulator 9 | 0.8(1) | 4.6(1.3E-04) | −1.5(1) | 3.5(1.4E-14) |
| Cassava4.1_015815 m.g | Response regulator 9 | −0.2(1) | 4.0(6.9E-24) | −1.5(1) | 1.8(2.3E-01) |
| Cassava4.1_018229 m.g | Histidine-containing phosphotransmitter 1 | 0.4(1) | 1.0(3.0E-01) | −0.5(1) | 1.4(4.1E-07) |
| Cassava4.1_018306 m.g | Histidine-containing phosphotransmitter 1 | −0.4(1) | 3.2(7.0E-07) | 0.8(1) | −1.1(5.0E-01) |
| Cassava4.1_022288 m.g | Response regulator 9 | 0.9(1) | 4.1(1.6E-01) | 0.3(1) | 2.5(8.7E-08) |
| Cassava4.1_022850 m.g | Pseudo-response regulator 7 | 0.2(1) | 4.4(1.0E-14) | −0.5(1) | 2.5(4.5E-08) |
| Cassava4.1_024410 m.g | Histidine kinase 5 | −0.2(1) | 3.8(1.9E-02) | 2.6(1) | 0.1(1.0E + 00) |
| Cassava4.1_025220 m.g | Pseudo-response regulator 3 | 0.7(1) | 4.3(2.5E-16) | −0.5(1) | 1.2(1.7E-03) |
| Cassava4.1_026975 m.g | Response regulator 3 | 0.4(1) | 4.1(3.0E-03) | 0.0(1) | 3.5(1.3E-12) |
| Cassava4.1_033332 m.g | Pseudo-response regulator 9 | 0.4(1) | 1.3(5.6E-04) | −0.7(1) | 1.0(2.9E-04) |
| Cassava4.1_002375 m.g | Signal transduction histidine kinase, hybrid-type, ethylene sensor | −0.6(1) | −2.6(4.8E-06) | −0.2(1) | 0.8(1.2E-02) |
| Cassava4.1_015797 m.g | Response regulator 5 | −0.4(1) | 1.5(5.0E-01) | −1.3(1) | 1.3(1.6E-02) |
| Cassava4.1_023472 m.g | Response regulator 3 | −0.7(1) | 0.2(9.4E-01) | 0.6(1) | 1.4(3.8E-03) |
| Cassava4.1_027609 m.g | Response regulator 9 | 0.7(1) | 0.2(9.6E-01) | −0.4(1) | 1.8(2.3E-07) |
| Cassava4.1_027924 m.g | Signal transduction histidine kinase, hybrid-type, ethylene sensor | 0.1(1) | 0.2(8.3E-01) | 0.8(1) | 0.8(5.2E-02) |
| Cassava4.1_028820 m.g | Response regulator 2 | 0.2(1) | 1.4(8.4E-02) | −0.2(1) | 1.4(4.8E-02) |