Table 5.
Prior distributions used for all ABC analyses.
Description | Prior distribution | |||
---|---|---|---|---|
Mutation Parameters | ||||
Mutation model | HKY | 10% invariant sites | Shape (2) | |
Mean mutation rate | Uniform | (min) 1.00E-7 | (max) 1.00E-5 | |
Indiv. locus mutation rate | Gamma | (min) 1.00E-7 | (max) 1.00E-5 | Shape (2) |
Mean coefficient (k C/T) | Uniform | (min) 1.5 | (max) 20 | |
Indiv. locus coefficient (k C/T) | Gamma | (min) 1.5 | (max) 20 | Shape (2) |
Mutation parameters refer to selected DNA mutation model, distributions used, and bounds for said distributions within the model validation screen.