Table 1.

Sequence reads, read quality, and error rates

Sample name	Raw reads	Clean reads	Clean bases	Error rate (%)	Q20 (%)	Q30 (%)	GC content (%)
R_As24h	50,921,692	48,696,660	7.3G	0.02	96.79	91.95	50.91
S_As24h	48,149,668	45,974,494	6.9G	0.02	96.62	91.61	50.96
R_As13d	53,198,176	50,759,128	7.61G	0.02	96.49	91.41	49.43
S_As13d	48,863,236	46,720,102	7.01G	0.02	96.57	91.51	50.12
R_As19d	51,480,496	49,154,934	7.37G	0.02	96.59	91.57	50.71
S_As19d	45,488,110	43,544,700	6.53G	0.02	96.69	91.72	50.95

Note: Raw reads, sequence reads from each RNA sample; Clean reads, reads following the removal of adapters, low quality reads or reads with 'N' > 1%; Clean bases, read number times read length; Error rate, calculated error rate based on read quality; Q20 (%) and Q30 (%), percentage of bases with Phred score > 20 or 30; GC content (%), percentage of G plus C in the sequences