|
8-oxo-G incision |
5′-GAA CTG T(O)A GAC TGA T, |
3′- GCT GAC A C T GAA CTG ACG ACT A; |
|
Uracil incision |
5′-ATA GG(U) CGG ATC AAG ATT, |
3′-TAT CC (G or A) GCC GAA TAA |
|
AP incision |
5′-GAA CTG T (F) A GAC TGA T, |
3′- GCT GAC A C T GAA CTG ACG ACT A |
|
Incorporation |
5′-CTG CTG ( )GT ACG GAT CGG C, |
3′-GAC GTC GAC GCA GCC G. |
|
Nick |
5`-TCC GTT GAA GCC TGC TTT_GAC ATA CTA ACT TGA GCG AAA CGG-T- 3` |
(Ligation) |
3`- T- ACG CAA CTT CGG ACG AAA CTG TAT GAT TGA ACT CGC TTT GCC-5` |
|
BER |
5`-TCC GTT GAA GCC TGC TTT_()AC ATA CTA ACT TGA GCG AAA CGG-T- 3` |
(Incorporation and Ligation) |
3`- T- ACG CAA CTT CGG ACG AAA CTG TAT GAT TGA ACT CGC TTT GCC-5` |
|
LP-BER |
5`-GTC CAC CCG ACG CCA CCT CCT GCC TTC AAT GTG CTG ( ) GAT CCT ACA ACC AAG ACG AAT TCC GGA TAC GAC GGC CAG TGC CGA CCG TGC CAG CCT AAA TTT CAA TCC ACC C- 3` |
3`- CAG GTG GGC TGC GGT GGA GGA CGG AAG TTA CAC GAC C CTA GGA TGT TGG TTC TGC TTA AGG CCT ATG CTG CCG GTC ACG GCT GGC ACG GTC GGA TTT AAA GTT AGG TGG G- 5` |