Table 1.
Featuresa | C. cicadae | I. fumosorosea | C. militaris | B. bassiana | M. robertsii |
---|---|---|---|---|---|
Size (Mb) | 33.9 | 33.5 | 32.2 | 33.7 | 39 |
Coverage fold | 80× | 86.99× | 147× | 76.6 × | 100× |
Scaffold no. (>1 kb) | 599 | 430 | 13 | 242 | 176 |
Scaffold N50 (Mb) | 0.21 | 0.87 | 4.55 | 0.73 | 1.96 |
% G + C content | 53.0 | 53.6 | 51.4 | 51.5 | 51.5 |
% Repeat rate | 3.19 | 3.84 | 3.04 | 2.03 | 0.98 |
Protein-coding genes | 9701 | 10,060 | 9684 | 10,366 | 10,582 |
Gene density (per Mb) | 286 | 300 | 301 | 308 | 271 |
Exons per gene | 2.6 | 2.6 | 3 | 2.7 | 2.8 |
Protein families | 2592 | 2876 | 2736 | 3002 | 2797 |
Putative PHI genes | 1490 | 1604 | 1547 | 2121 | 1828 |
SSCPs | 268 | 287 | 207 | 305 | 283 |
Secreted proteins | 1031 | 1390 | 1133 | 1378 | 1333 |
Proteases | 388 | 395 | 371 | 386 | 390 |
Secreted proteases | 127 | 158 | 120 | 142 | 1660 |
GPCRs | 38 | 39 | 29 | 32 | 64 |
Lipases | 29 | 21 | 23 | 28 | 35 |
Secondary metabolisms | 34 | 36 | 29 | 42 | 62 |
Glycoside hydrolases | 135 | 143 | 134 | 144 | 149 |
Cytochrome P450s | 67 | 76 | 65 | 89 | 133 |
Bacterial-like toxins | 16 | 12 | 6 | 26 | 16 |
a,Abbreviations: Mb mega base, PHI pathogen-host interaction, SSCP small secreted cysteine-rich protein, GPCR G-protein coupled receptor