Table 1.
Top 10 annotation terms with the highest FDR in enrichment analysis of protein clusters A and B from unsupervised hierarchical clustering. (GOCC = GeneOntology cell compartment; KEGG = Kyoto Encyclopedia of Genes and Genomes; GOBP = GeneOntology biological process; GOMF = GeneOntology molecular function.)
Type | Name | p-Value | Enrichment | Total | In Cluster | Cluster Size | Benj. Hoch. FDR |
---|---|---|---|---|---|---|---|
Cluster A: Significantly Higher Protein Levels in Post-flight Group | |||||||
GOCC name | Ribonucleoprotein complex | 1.62 × 10−14 | 1.92 | 55 | 52 | 218 | 1.90 × 10−12 |
KEGG name | Ribosome | 1.70 × 10−11 | 1.97 | 38 | 37 | 218 | 3.13 × 10−9 |
GOBP name | Cellular amino acid metabolic process | 2.23 × 10−12 | 1.82 | 59 | 53 | 218 | 7.79 × 10−9 |
GOBP name | Cellular nitrogen compound metabolic process | 1.07 × 10−11 | 1.54 | 116 | 88 | 218 | 1.87 × 10−8 |
GOMF name | Structural constituent of ribosome | 3.68 × 10−11 | 1.97 | 37 | 36 | 218 | 3.37 × 10−8 |
GOBP name | Nitrogen compound metabolic process | 3.29 × 10−11 | 1.52 | 119 | 89 | 218 | 3.83 × 10−8 |
GOCC name | Mitochondrial matrix | 1.69 × 10−9 | 1.91 | 36 | 34 | 218 | 9.86 × 10−8 |
GOBP name | Cellular amine metabolic process | 6.56 × 10−10 | 1.71 | 63 | 53 | 218 | 5.73 × 10−7 |
GOBP name | Translation | 1.69 × 10−9 | 1.91 | 36 | 34 | 218 | 9.81 × 10−7 |
GOBP name | Macromolecule biosynthetic process | 1.41 × 10−9 | 1.76 | 53 | 46 | 218 | 9.84 × 10−7 |
Cluster B: Significantly Lower Protein Levels in Post-flight Group | |||||||
GOCC name | Membrane part | 1.04 × 10−30 | 1.65 | 173 | 145 | 224 | 4.85 × 10−28 |
GOCC name | Intrinsic to membrane | 6.62 × 10−23 | 1.80 | 102 | 93 | 224 | 1.03 × 10−20 |
GOCC name | Integral to membrane | 6.62 × 10−23 | 1.80 | 102 | 93 | 224 | 1.55 × 10−20 |
GOCC name | Organelle membrane | 3.49 × 10−14 | 1.47 | 157 | 117 | 224 | 3.26 × 10−12 |
GOCC name | Endoplasmic reticulum part | 7.21 × 10−12 | 1.72 | 69 | 60 | 224 | 5.63 × 10−10 |
GOCC name | Endoplasmic reticulum | 5.52 × 10−11 | 1.84 | 46 | 43 | 224 | 3.69 × 10−9 |
GOCC name | Endoplasmic reticulum membrane | 2.47 × 10−9 | 1.72 | 54 | 47 | 224 | 1.28 × 10−7 |
GOCC name | Plasma membrane part | 5.85 × 10−8 | 1.67 | 52 | 44 | 224 | 2.74 × 10−6 |
GOCC name | Membrane | 4.95 × 10−7 | 1.19 | 260 | 157 | 224 | 2.10 × 10−5 |
GOMF name | Transporter activity | 1.46 × 10−6 | 1.78 | 31 | 28 | 224 | 2.67 × 10−4 |