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. 2017 Aug 12;18(8):1763. doi: 10.3390/ijms18081763

Table 1.

Top 10 annotation terms with the highest FDR in enrichment analysis of protein clusters A and B from unsupervised hierarchical clustering. (GOCC = GeneOntology cell compartment; KEGG = Kyoto Encyclopedia of Genes and Genomes; GOBP = GeneOntology biological process; GOMF = GeneOntology molecular function.)

Type Name p-Value Enrichment Total In Cluster Cluster Size Benj. Hoch. FDR
Cluster A: Significantly Higher Protein Levels in Post-flight Group
GOCC name Ribonucleoprotein complex 1.62 × 10−14 1.92 55 52 218 1.90 × 10−12
KEGG name Ribosome 1.70 × 10−11 1.97 38 37 218 3.13 × 10−9
GOBP name Cellular amino acid metabolic process 2.23 × 10−12 1.82 59 53 218 7.79 × 10−9
GOBP name Cellular nitrogen compound metabolic process 1.07 × 10−11 1.54 116 88 218 1.87 × 10−8
GOMF name Structural constituent of ribosome 3.68 × 10−11 1.97 37 36 218 3.37 × 10−8
GOBP name Nitrogen compound metabolic process 3.29 × 10−11 1.52 119 89 218 3.83 × 10−8
GOCC name Mitochondrial matrix 1.69 × 10−9 1.91 36 34 218 9.86 × 10−8
GOBP name Cellular amine metabolic process 6.56 × 10−10 1.71 63 53 218 5.73 × 10−7
GOBP name Translation 1.69 × 10−9 1.91 36 34 218 9.81 × 10−7
GOBP name Macromolecule biosynthetic process 1.41 × 10−9 1.76 53 46 218 9.84 × 10−7
Cluster B: Significantly Lower Protein Levels in Post-flight Group
GOCC name Membrane part 1.04 × 10−30 1.65 173 145 224 4.85 × 10−28
GOCC name Intrinsic to membrane 6.62 × 10−23 1.80 102 93 224 1.03 × 10−20
GOCC name Integral to membrane 6.62 × 10−23 1.80 102 93 224 1.55 × 10−20
GOCC name Organelle membrane 3.49 × 10−14 1.47 157 117 224 3.26 × 10−12
GOCC name Endoplasmic reticulum part 7.21 × 10−12 1.72 69 60 224 5.63 × 10−10
GOCC name Endoplasmic reticulum 5.52 × 10−11 1.84 46 43 224 3.69 × 10−9
GOCC name Endoplasmic reticulum membrane 2.47 × 10−9 1.72 54 47 224 1.28 × 10−7
GOCC name Plasma membrane part 5.85 × 10−8 1.67 52 44 224 2.74 × 10−6
GOCC name Membrane 4.95 × 10−7 1.19 260 157 224 2.10 × 10−5
GOMF name Transporter activity 1.46 × 10−6 1.78 31 28 224 2.67 × 10−4