Table 4. Location information of candidate SNPs in this study.
SNP_ID | Gene | Region | Position | MAF (Han) | MAF (Tibetan) | ||
---|---|---|---|---|---|---|---|
Case | Control | Case | Control | ||||
rs2230597 | exonic | 16464673 | 0.207 | 0.155 | 0.157 | 0.150 | |
rs6678616 | exonic | 16475123 | 0.029 | 0.086 | 0.021 | 0.033 | |
rs2291804 | intronic | 16464936 | 0.021 | 0.138 | 0.014 | 0.000 | |
rs35127370 | intronic | 16474840 | 0.093 | 0.121 | 0.100 | 0.100 | |
rs2291805 | intronic | 16458814 | 0.093 | 0.259 | 0.086 | 0.100 | |
rs3768294 | intronic | 16456176 | 0.100 | 0.276 | 0.099 | 0.107 | |
rs6678618 | EPHA2 | exonic | 16475126 | 0.029 | 0.086 | 0.021 | 0.033 |
rs6603883 | upstream | 16482976 | 0.136 | 0.138 | 0.129 | 0.133 | |
rs3754334 | exonic | 16451767 | 0.143 | 0.293 | 0.136 | 0.150 | |
rs6603856 | intronic | 16460840 | 0.093 | 0.241 | 0.101 | 0.117 | |
rs6669624 | intronic | 16460339 | 0.086 | 0.207 | 0.091 | 0.083 | |
rs11260742 | intronic | 16464260 | 0.107 | 0.259 | 0.107 | 0.117 | |
rs13375644 | intronic | 16461833 | 0.086 | 0.241 | 0.091 | 0.080 | |
rs10907223 | exonic | 16459745 | 0.093 | 0.224 | 0.100 | 0.117 | |
rs699 | exonic | 230845794 | 0.179 | 0.328 | 0.300 | 0.333 | |
rs11122576 | intronic | 230846679 | 0.350 | 0.241 | 0.307 | 0.300 | |
rs5046 | upstream | 230850398 | 0.221 | 0.138 | 0.093 | 0.117 | |
rs3789679 | intronic | 230849694 | 0.358 | 0.232 | 0.246 | 0.241 | |
rs1926722 | intronic | 230840197 | 0.379 | 0.293 | 0.286 | 0.300 | |
rs4762 | exonic | 230845977 | 0.050 | 0.172 | 0.043 | 0.050 | |
rs28730748 | AGT | intronic | 230845571 | 0.059 | 0.121 | 0.101 | 0.179 |
rs2071406 | upstream | 230850641 | 0.150 | 0.172 | 0.214 | 0.183 | |
rs5050 | UTR5 | 230849886 | 0.107 | 0.172 | 0.064 | 0.100 | |
rs11122575 | intronic | 230840269 | 0.211 | 0.173 | 0.186 | 0.130 | |
rs3827749 | intronic | 230841559 | 0.243 | 0.345 | 0.236 | 0.233 | |
rs5051 | UTR5 | 230849872 | 0.179 | 0.345 | 0.314 | 0.333 | |
rs11568020 | UTR5 | 230850018 | 0.050 | 0.017 | 0.021 | 0.033 | |
rs2478523 | intronic | 230841509 | 0.400 | 0.442 | 0.330 | 0.158 |
MAF: minor allele frequency