Table 3.
Sample | Total reads | Total nucleotides (bp) | Q20 (%) | Q30 (%) | GC (%) |
---|---|---|---|---|---|
Peak egg-production stage | 42,782,676 | 4,307,499,083 | 93.12 | 85.00 | 51.86 |
Late egg-production stage | 45,316, 66 | 4,562,063,363 | 93.11 | 84.94 | 52.93 |
Q20 is the percentage of sequences with base quality score that was no less than 20.
Q30 is the percentage of sequences with base quality score that was no less than 30.
GC is the percentage of bases G and C in the sequences.