Table 3.
Up-regulated transcripts in Citrus sinensis in response to infection by CTV-B2/CTV-B6.
| Gene symbol | Transcript id_ Citrus sinensis | AGI | Gene description | Fold change |
|---|---|---|---|---|
| CELL WALL | ||||
| CESA9 | Orange1.1g001373m | AT2G21770 | Cellulose synthase A9 | 1.25 |
| PRP4 | Orange1.1g029350m | AT4G38770 | Proline-rich protein 4 | 1.43 |
| XTR2, XTH28 | Orange1.1g019909m | AT1G14720 | Xyloglucan endotransglycosylase related 2 | 1.66 |
| XTR4, XTH30 | Orange1.1g018153m | AT1G32170 | Xyloglucan endotransglycosylase 4 | 2.24 |
| EXLB1 | Orange1.1g025808m | AT4G17030 | Arabidopsis thaliana expansin-like B1 | 2.21 |
| EXLB3 | Orange1.1g032956m | AT2G18660 | Expansin-like B3 Precursor | 6.86 |
| METAL HANDLING AND TRANSPORT | ||||
| FRO6 | Orange1.1g006160m | AT5G49730 | Ferric reduction oxidase 6 | 1.38 |
| FP6 | Orange1.1g031705m | AT4G38580 | Farnesylated protein 6; metal ion binding | 1.71 |
| ZIP1 | Orange1.1g018051m | AT3G12750 | Zinc transporter 1 precursor | 11.13 |
| ZIP5 | Orange1.1g044821m | AT1G05300 | Metal ion transmembrane transporter | 5.44 |
| ZIP11 | Orange1.1g044590m | AT1G55910 | Zinc transporter 11 precursor | 1.30 |
| AAP6 | Orange1.1g011548m | AT5G49630 | Amino acid permease 6 | 1.30 |
| AAP7 | Orange1.1g012732m | AT5G23810 | Amino acid transmembrane transporter | 1.34 |
| AST56, SULTR2;2 | Orange1.1g008914m | AT1G77990 | Sulfate transmembrane transporter | 1.29 |
| AST68, SULTR2;1 | Orange1.1g006023m | AT5G10180 | Sulfate transmembrane transporter | 1.07 |
| NRT1.1 | Orange1.1g007736m | AT1G12110 | Nitrate transmembrane transporter | 1.38 |
| ABC | Orange1.1g045930m | AT1G51460 | ABC transporter family protein | 2.95 |
| DEFENSE RELATED | ||||
| TPS21 | Orange1.1g043754m | AT5G23960 | Terpene synthase 21 | 2.65 |
| CER3 | Orange1.1g006767m | AT5G57800 | Eceriferum 3 | 2.28 |
| TT4 | Orange1.1g016330m | AT5G13930 | Transparent testa 4 | 1.20 |
| AFB5 | Orange1.1g044749m | AT5G49980 | Auxin F-box protein 5 | 1.72 |
| GA5 | Orange1.1g016776m | AT4G25420 | GA5 | 1.64 |
| ERS1 | Orange1.1g005591m | AT2G40940 | Ethylene response sensor 1 | 1.63 |
| EIN4 | Orange1.1g004510m | AT3G04580 | Ethylene insensitive 4 | 1.20 |
| RLP21 | Orange1.1g021196m | AT2G25470 | Receptor like protein 21 | 1.40 |
| CHIB1 | Orange1.1g044801m | AT5G24090 | Acidic endochitinase | 3.13 |
| EDS1 | Orange1.1g007278m | AT3G48090 | Enhanced disease susceptibility 1 | 1.20 |
| NBS-LRR class | Orange1.1g046345m | AT4G27190 | Disease resistance protein | 1.17 |
| NBS-LRR class | Orange1.1g040659m | AT5G63020 | Disease resistance protein | 1.08 |
| RLP1 | Orange1.1g042603m | AT1G07390 | Protein binding | 2.03 |
| RLP6 | Orange1.1g038037m | AT1G45616 | Receptor like protein 6 | 2.43 |
| RLP15 | Orange1.1g001036m | AT1G74190 | Receptor like protein 15 | 4.48 |
| CES101 | Orange1.1g004402m | AT3G16030 | Callus expression of Rbcs 101 | 1.58 |
| IQD23 | Orange1.1g013059m | AT5G62070 | IQ-domain 23 | 2.18 |
| FRS5 | Orange1.1g002062m | AT4G38180 | Far1-related sequence 5 | 1.10 |