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. 2017 Aug 14;114(35):9403–9408. doi: 10.1073/pnas.1707410114

Table S2.

Parameters used to generate mouse and vole molar simulations

Parameter category Parameter Mouse Vole
Iterations 14,000 14,000
Degradation Deg (Protein degradation rate) 0.076 0.076
Growth factor Set (Growth factor threshold) 0.95 0.95
Sec (Growth factor secretion rate) 0.14 0.14
Ds (Growth factor diffusion rate) 1.0 1.0
Activator Act (Activators) 1.6 1.6
Da (Activator diffusion rate) 0.2 0.2
Lbi (Lingual bias) 1.34 0.4
Bbi (Buccal bias) 1.31 0.0001
Ina (Initial activator concentration) 0.0 0.0
Inhibitor Int (Initial inhibitor threshold) 0.19 0.19
Inh (Inhibitors) 800.0 800.0
Di (Inhibitor diffusion rate) 0.2 0.2
Epithelium Egr (Epithelial growth) 0.013 0.013
Dgr (Downward vector of growth) 10,500.0 10,500.0
Dff (Differentiation rate) 0.0002 0.0002
Adh (Traction between neighbors) 0.005 0.005
Rep (Young's modulus, stiffness) 1.5 1.5
Ntr (Mechanical traction from the borders to the nucleus) 0.00013 0.00013
Abi (Anterior bias) 3.2 8.0
Pbi (Posterior bias) 7.0 5.0
Mesenchyme Mgr (Mesenchymal growth) 16,000.0 16,000.0
Bgr (Border growth amount in antero-posterior) 0.2 0.2
Boy (Mesenchyme mechanic resistance) 0.17 0.17
Initial size Rad (Radius of initial conditions) 3.0 3.0
Swi (Distance from 0 where the borders are defined) 1.51 1.51
Bwi (Width of border) 3.4 3.4

Parameters with different values in mouse and vole simulations are in bold. For parameters, see Materials and Methods and refs. 12 and 31. The model has the mouse parameter values as defaults (it can be downloaded at dead.cthulhu.fi/ToothMaker/).