Table 3.
Genome statistics
| Attribute | Value | % of Totala |
|---|---|---|
| Genome size (bp) | 8,032,739 | 100.0 |
| DNA coding (bp) | 6,603,166 | 82.20 |
| DNA G + C (bp) | 5,760,840 | 71.72 |
| DNA Contigs289100 | .0 | |
| Total genes | 6859 | 100.0 |
| Protein coding genes | 6, 211 | 91.01 |
| RNA genes | 53 | 0.77 |
| Pseudo genesb | 561 | 8.18 |
| Genes in internal clusters | - | - |
| Genes with function prediction | 5046 | 73.60 |
| Genes assigned to COGs | 3609 | 52.64 |
| Genes with Pfam domains | 4735 | 69.06 |
| Genes with signal peptides | 176 | 2.57 |
| Genes with transmembrane helices | 296 | 4.32 |
| CRISPR repeats | 2 | - |
aThe total is based on either the size of the genome in base pairs or the total genes in the annotated genome
bPseudo genes may also be counted as protein coding or RNA genes, so is not additive under total gene count