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. Author manuscript; available in PMC: 2018 Oct 1.
Published in final edited form as: Mol Oral Microbiol. 2017 May 25;32(5):419–431. doi: 10.1111/omi.12183

Table 2.

Oligonucleotides used in this study

Primer Name Sequence 5′-3′ Product size (bp) Source
16SRNAF
16SRNAR		 CGGCAAGCTAATCTCTGAAA
GCCCCTAAAAGGTTACCTCA		 190 17
smu360F
smu360R		 CCTAACTCAACTGGTGCTGCT
CAGCATTCACTTCATCAACAG		 161 This study
smu630F
smu630R		 AGAATGGATGCTCTTGGCTTA
GCTGTCATAGGCTGTGTTTCA		 170 This study
smu676F
smu676R		 TCGTATGGAAGGTGAAGTC
GTAAGAGCCCTGAGATTGAT		 218 This study
smu2036F
smu2036R		 TACCCATAGCTTGAGGTGT
ACACCAGAACTGCCTTTAG		 253 This study
smu399F
smu399R		 GATTGAAGAGTCACCGGATA
CCGCTTGTTTAGTCTCTTGA		 242 This study
smu1247F
smu1247R		 GACTTCTTCACCTGGTTTG
CTCACTCAGATGCTCCAAT		 251 This study
smu609F
smu609R		 GGCACAAGGAACCTATCACTTT
GCTTTCCAATAACAACATAACGAC		 191 10
smu2146F
smu2146R		 AATCTGTTCTTGCTCACACTGC
ACATTATCAGTTGGTTCAGTTGCT		 145 10
smu2147cF
smu2147cR		 TTATCAGAGATTGCTTCAACACA
CTGAGGTTTCTGCTTCATTTATC		 175 10
ermE1-AscI
ermE2-XhoI		 TTGGCGCGCCTGGCGGAAACGTAAAAGAAG
TTCTCGAGGGCTCCTTGGAAGCTGTCAGT		 998 10
smu.399P1
smu.399P2-AscI		 TCTTCTTCACCATTTCTTGC
TTGGCGCGCCCGGTGACTCTTCAATCAAAA		 496 This study
smu.399P3-XhoI
smu.399P4		 TTCTCGAGTGTTGAGAGTCATGGAGAGG
AAAGCTGCCTGATGGTTACT		 505 This study
smu.2036P1
smu.2036P2-AscI		 TTTACTATCGGCGCTAAGGT
TTGGCGCGCCACTGTTTCGGAAAATGTGG		 501 This study
smu.2036P3-XhoI
smu.2036P4		 TTCTCGAGGACGATGGAACTTCACAAAA
GATCAAAGGCAATTTACGGG		 490 This study
smu.399C1-PvuI
smu.399C2-BamHI		 GGCGATCGTGGATGTTACGTGGACTGT
GGGGATCCGGCCATCATAAAGTGCTAAA		 1,883 This study
smu.2036C1-BamHI
smu.2036C2-SphI		 GGGGATCCATGCCGCTAATTGCTCAAG
GGGCATGCAGTCAATGAAAAAACGCTTGA		 2,750 This study
a

Underlined sequences indicate restriction enzyme linkers.