Table 1.
Detailed information about the SlZHD genes and corresponding proteins in tomato
| Gene name | Locus name | ORF (bp) | Location | Length (aa) | Domain (start-end) | Mol. wt (kDa) | pI | Exons | Subcellular localization |
|---|---|---|---|---|---|---|---|---|---|
| SlZHD1 | Solyc01g014970 | 690 | SL2.50ch01:16,338,200…16,339,565 (−strand) | 229 | 20–71 | 25,789.04 | 8.12 | 2 | Extracellular |
| SlZHD2 | Solyc01g102980 | 873 | SL2.50ch01:91,639,500…91,641,389 (+ strand) | 290 | 64–118 | 32,600.98 | 7.76 | 2 | Nuclear |
| SlZHD3 | Solyc01g103810 | 351 | SL2.50ch01:92,343,498…92,343,848 (− strand) | 116 | 14–68 | 13,144.06 | 9.46 | 1 | Cytoplasmic |
| SlZHD4 | Solyc01g103820 | 285 | SL2.50ch01:92,348,106…92,348,390 (− strand) | 94 | 14–68 | 10,361.66 | 8.27 | 1 | Cytoplasmic |
| SlZHD5 | Solyc01g103830 | 633 | SL2.50ch01:92,352,642…92,353,696 (− strand) | 210 | 10–64 | 24,492.28 | 9.68 | 2 | Extracellular |
| SlZHD6 | Solyc01g103840 | 255 | SL2.50ch01:92,360,326…92,360,580 (− strand) | 84 | 10–64 | 9529.72 | 6.27 | 1 | Extracellular |
| SlZHD7 | Solyc02g067310 | 879 | SL2.50ch02:37,494,131…37,495,541 (+ strand) | 292 | 62–118 | 32,086.75 | 8.20 | 2 | Nuclear |
| SlZHD8 | Solyc02g067320 | 996 | SL2.50ch02:37,520,623…37,521,618 (− strand) | 331 | 53–109 | 36,516.54 | 7.75 | 1 | Nuclear |
| SlZHD9 | Solyc02g067330 | 309 | SL2.50ch02:37,527,458…37,527,766 (− strand) | 102 | 29–83 | 11,208.36 | 6.18 | 1 | Cytoplasmic |
| SlZHD10 | Solyc02g085160 | 882 | SL2.50ch02:48,141,575…48,142,456 (− strand) | 293 | 89–143 | 33,312.95 | 8.14 | 1 | Nuclear |
| SlZHD11 | Solyc02g087970 | 273 | SL2.50ch02:50,205,827…50,206,099 (+ strand) | 90 | 23–75 | 10,104.24 | 9.07 | 1 | Cytoplasmic |
| SlZHD12 | Solyc03g061620 | 267 | SL2.50ch03:31,305,510…31,305,776 (− strand) | 88 | 23–77 | 9648.53 | 5.76 | 1 | Cytoplasmic |
| SlZHD13 | Solyc03g098060 | 540 | SL2.50ch03:60,406,311…60,406,850 (− strand) | 179 | 7–64 | 19,951.89 | 8.47 | 1 | Nuclear |
| SlZHD14 | Solyc03g116070 | 252 | SL2.50ch03:65,585,458…65,585,709 (− strand) | 83 | 21–74 | 9037.14 | 8.75 | 1 | Cytoplasmic |
| SlZHD15 | Solyc04g014260 | 744 | SL2.50ch04:4,560,854...4561970 (− strand) | 247 | 54–107 | 27,722.19 | 7.16 | 2 | Nuclear |
| SlZHD16 | Solyc04g074990 | 432 | SL2.50ch04:60,885,156...60886298 (+ strand) | 143 | 45–99 | 16,096.89 | 5.97 | 3 | Cytoplasmic |
| SlZHD17 | Solyc04g080490 | 873 | SL2.50ch04:64,650,886…64,652,793 (− strand) | 290 | 57–111 | 31,547.28 | 8.72 | 2 | Nuclear |
| SlZHD18 | Solyc05g007580 | 894 | SL2.50ch05:2,120,151…2,121,044 (− strand) | 297 | 52–108 | 32,814.23 | 7.26 | 1 | Nuclear |
| SlZHD19 | Solyc05g018740 | 360 | SL2.50ch05:23,129,391...23129750 (− strand) | 119 | 14–68 | 13,674.54 | 9.30 | 1 | Cytoplasmic |
| SlZHD20 | Solyc05g020000 | 360 | SL2.50ch05:25,503,046...25503405 (− strand) | 119 | 14–68 | 13,702.57 | 9.44 | 1 | Cytoplasmic |
| SlZHD21 | Solyc05g051420 | 504 | SL2.50ch05:61,721,814...61724132 (− strand) | 167 | 1–50 | 19,300.40 | 9.75 | 2 | Nuclear |
| SlZHD22 | Solyc09g089550 | 2418 | SL2.50ch09:69,252,813...69257262 (− strand) | 805 | 554–608 | 90,496.49 | 6.97 | 4 | Extracellular |
ORF Open reading frame, bp base pair, aa amino acid, pI isoelectric point, kDa kilodaltons