Table 1.
Statistics on quality trimming and assembly construction for the transcriptome assemblies.
| Samples | Kiziltan Control | Kiziltan Drought | TR39477 Control | TR39477 Drought | TTD-22 Control | TTD-22 Drought |
|---|---|---|---|---|---|---|
| The quality trimming of samples | ||||||
| Before trimming | 35,463,556 | 36,944,980 | 35,212,424 | 30,670,932 | 27,505,294 | 32,690,630 |
| After trimming | 33,772,655 | 35,171,816 | 33,698,813 | 29,223,580 | 26,200,743 | 31,249,427 |
| Assembly statistics for the samples | ||||||
| Number of transcripts | 204128 | 18817 | 169762 | 159940 | 168314 | 155170 |
| Median contig length (b) | 482 | 516 | 478 | 483 | 468 | 494 |
| Average contig | 666.67 | 779.58 | 731.65 | 741.67 | 726.12 | 752.61 |
| Total length (Mb) | 99.78 | 146.69 | 129.32 | 125.24 | 122.22 | 116.78 |
| GC% | 49.72 | 49.45 | 49.98 | 49.92 | 50.63 | 50.25 |
| N50 | 1024 | 1082 | 1001 | 1108 | 1004 | 1056 |