Table 3.
Carbohydrate transport and metabolism (G)a.
| NCBI GI | Gene ID | Gene | Protein description | Loc.b | Signal peptide | Mean ratio(I/C) | SD | Ratio |
|---|---|---|---|---|---|---|---|---|
| Glycolysis/Gluconeogenesis | ||||||||
| GI:82699048 | BAB1_0128 | zinc-containing alcohol dehydrogenase | C | NO | 1.35 | 0.10 | ↑ | |
| GI:82699119 | BAB1_0211 | aldehyde dehydrogenase | U | NO | 0.75 | 0.02 | ↓ | |
| GI:91206675 | BAB1_0316 | pgi | Glucose-6-phosphate isomerase | C | NO | 0.60 | 0.06 | ↓ |
| GI:82699972 | BAB1_1155 | eno | enolase | U | NO | 1.60 | 0.40 | ↑ |
| GI:82698932 | BAB1_1742 | pgk | Phosphoglycerate kinase | C | NO | 1.45 | 0.02 | ↑ |
| GI:82700535 | BAB1_1761 | pyk | pyruvate kinase | U | NO | 1.51 | 0.07 | ↑ |
| GI:83269246 | BAB2_0327 | aldehyde dehydrogenase | U | NO | 0.46 | 0.04 | ↓ | |
| GI:83269280 | BAB2_0364 | fructose-1,6-bisphosphatase | U | NO | 2.13 | 0.35 | ↑ | |
| GI:83269281 | BAB2_0365 | fbaA | fructose-1,6-bisphosphate aldolase | U | NO | 1.86 | 0.16 | ↑ |
| Pentose Phosphate Shunt | ||||||||
| GI:82700516 | BAB1_1740 | tkt | transketolase | C | NO | 1.25 | 0.04 | ↑ |
| GI:83269362 | BAB2_0459 | pgl | 6-phosphogluconolactonase | U | NO | 0.63 | 0.05 | ↓ |
| GI:83269363 | BAB2_0460 | glucose-6-phosphate 1-dehydrogenase | U | NO | 0.70 | 0.09 | ↓ | |
| ATP-binding cassette ABC transporter complex | ||||||||
| GI:82699142 | BAB1_0238 | ABC-type sugar transport system, periplasmic comp. | U | YES | 0.60 | 0.09 | ↓ | |
| GI:82699145 | BAB1_0241 | ABC-type sugar transport systems, ATPase comp. | U | NO | 0.60 | 0.06 | ↓ | |
| GI:82700425 | BAB1_1648 | ABC-type sugar transport system, periplasmic comp | U | NO | 0.55 | 0.07 | ↓ | |
| GI:83269394 | BAB2_0491 | ABC-type sugar transport system, periplasmic comp. | U | NO | 1.62 | 0.21 | ↑ | |
| GI:82939718 | BAB2_0547 | Probable sugar-binding periplasmic protein precursor | U | YES | 0.36 | 0.07 | ↓ | |
| GI:83269478 | BAB2_0585 | ugpB | transport system substrate-binding protein | P | YES | 0.65 | 0.01 | ↓ |
| GI:83269790 | BAB2_0938 | ABC-type xylose transport system, periplasmic comp. | N | YES | 0.39 | 0.03 | ↓ | |
| Acting on carbohydrates and derivatives | ||||||||
| GI:82700159 | BAB1_1356 | fucU | RbsD or FucU transport | C | NO | 0.78 | 0.01 | ↓ |
| Inositol phosphate metabolism | ||||||||
| GI:82700499 | BAB1_1723 | inositol phosphatase/fructose-1,6-bisphosphatase | C | NO | 0.77 | 0.04 | ↓ | |
| Galactose metabolism | ||||||||
| GI:83269216 | BAB2_0294 | dihydroxy-acid dehydratase | U | NO | 0.62 | 0.01 | ↓ | |
| GI:83269217 | BAB2_0295 | 2-keto-3-deoxy-galactonokinase | U | NO | 0.57 | 0.04 | ↓ | |
| Propanoate metabolism | ||||||||
| GI:83269853 | BAB2_1009 | mgsA | methylglyoxal synthase | C | NO | 0.69 | 0.01 | ↓ |
aAbbreviations of assigned functional categories (http://www.ncbi.nih.gov/COG/).
bAbbreviations of cellular location. Protein cellular location was annotated by PSORTB v. 3.0 (http://www.psort.org/). C, cytoplasmic; P, periplasmic; U, unknown; CM, cytoplasmic
membrane.
Mean ratio (I/C), indicates the mean values of all I/C ratios with P < 0.05.
SD, indicates standard deviation of the mean.