Table 3. Up-regulation of CRISPR RNAs in Csa3a overexpression strains.
CRISPR RNA number | Nucleotide range | Spacer range | wt::csa3a Vs wt::p (log2-fold) | Δcas1::csa3a Vs Δcas1::p (log2-fold) | Δcas3cmr2αcmr2β::csa3a Vs Δcas3cmr2αcmr2β::p (log2-fold) |
---|---|---|---|---|---|
Locus 1 | |||||
RNA1 | 726, 244∼726, 652 | 16–23 | — | 2.97 | 1.61 |
RNA2 | 727, 425–727, 724 | 35–39 | — | 3.27 | 1.88 |
RNA3 | 727, 777–727, 795 | 40 | — | 2.79 | 1.97 |
RNA4 | 727, 943–728, 416 | 43–50 | — | 3.16 | 1.89 |
RNA5 | 728, 527–729, 527 | 52–67 | — | 2.82 | 2.07 |
RNA6 | 729, 652–730, 779 | 69–86 | 2.44 | 2.86 | 1.71 |
RNA7 | 730, 850–732, 056 | 88–106 | — | 3.20 | 2.20 |
RNA8 | 732, 156–732, 401 | 108–111 | — | 3.67 | 2.60 |
Locus 2 | |||||
RNA9 | 736, 681–739, 941 | 1–50 | — | 3.25 | 1.27 |
RNA10 | 739, 992–740, 590 | 51–60 | 2.76 | 3.45 | 1.59 |
RNA11 | 740, 682–741, 337 | 62–72 | 2.78 | 3.26 | 1.56 |
RNA12 | 741, 391–742, 212 | 73–85 | — | 3.04 | 1.37 |
‘—’: not detected.