. 2017 Jul 3;16(9):1683–1693. doi: 10.1074/mcp.M117.068296

Table I. Differentially expressed Salmonella proteins in the ΔydcR strain at 18 hpi.

Gene	Protein description	Abundance^a		Fold^d	p value^e
Gene	Protein description	WT^b	ΔydcR^c	Fold^d	p value^e
ydcR	Putative GntR family regulatory protein	1.9E7	n.d^f	−34.8	0.001
STM0082	Putative secreted protein	9.6E6	n.d	−14.2	0.001
nupC	NUP family nucleoside transport protein	3.1E6	1.0E6	−3.1	0.021
cysN	Sulfate adenylyltransferase subunit 1	1.3E6	6.3E5	−2.1	0.004
STM2234	Putative tail fiber assembly protein	1.1E6	2.6E6	2.4	0.025
pipB	Pathogenicity island encoded protein: SPI5	2.6E6	5.9E6	2.2	0.020
yfgC	TPR repeat-containing protein YfgC	2.5E6	5.1E6	2.0	0.014
frdB	Fumarate reductase	8.7E5	1.7E6	2.0	0.039

^a Averaged LFQ intensity from three biological replicates.

^b Wild-type bacteria isolated from host cells at 18 hpi.

^c The ΔydcR strain isolated from host cells at 18 hpi.

^d Fold change in protein abundance (missing values were replaced by random numbers and negative values indicate lower levels in the ΔydcR samples).

^e p values were calculated by using the paired Student's t-test.

^f n.d, not detected in LC-MS/MS experiments.