Table 3.
Genome statistics
Attribute | Value | % of total |
---|---|---|
Genome size (bp) | 2217,891 | 100.00 |
DNA coding (bp) | 2,028,222 | 91.44 |
DNA G + C (bp) | 981,638 | 44.26 |
DNA scaffolds | 1 | |
Total genes | 2217 | 100.00 |
Protein-coding genes | 2146 | 96.80 |
RNA genes | 54 | 2.44 |
Pseudo genes | 17 | 0.77 |
Genes in internal clusters | NA | NA |
Genes with function prediction | 1559 | 70.32 |
Genes assigned to COGs | 1979 | 89.26 |
Genes with Pfam domains | 1770 | 79.84 |
Genes with signal peptides | 412 | 18.58 |
Genes with transmembrane helices | 513 | 23.14 |
CRISPR repeats | 1 |